Add session, fix local setup step

Author: prihoda

Makefile

@@ -12,7 +12,7 @@ env-update: environment.yml
 	conda env update -n $(ENV_NAME) -f $<
 
 env-setup:
-	$(CONDA_ACTIVATE); pip install -e .
+	$(CONDA_ACTIVATE); pip install -e . --no-deps
 
 pytest:
 	$(CONDA_ACTIVATE); \

biophi/__version__.py

@@ -1 +1 @@
-__version__ = '1.0.1'
+__version__ = '1.0.2'

biophi/common/web/views.py

@@ -12,6 +12,7 @@
 from biophi.common.utils.scheduler import use_scheduler, TaskNotFoundError
 from biophi.common.utils.stats import get_stats, log_access
 from biophi.humanization.web.views import biophi_humanization
+from flask_session import Session
 
 app = Flask(__name__)
 
@@ -34,6 +35,9 @@
     MAILCHIMP_NEWSLETTER=os.environ.get('MAILCHIMP_NEWSLETTER'),
 ))
 
+session = Session()
+session.init_app(app)
+
 app.jinja_env.globals.update(aa_name=aa_name)
 app.jinja_env.globals.update(seq3=seq3)
 app.jinja_env.globals.update(python_set=set)
@@ -48,7 +52,6 @@
 app.jinja_env.globals.update(min=min)
 app.jinja_env.globals.update(max=max)
 
-
 app.register_blueprint(biophi_humanization, url_prefix='/humanization')
 
 use_scheduler('celery')

environment.yml

@@ -20,3 +20,4 @@ dependencies:
     - xlsxwriter
     - humanize
     - fairseq == 0.10.2
+    - flask_session