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Commits on Jun 22, 2016

• Add download link to README

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Commits on Jan 13, 2016

• Set date of thesis submission

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Commits on Nov 6, 2015

• Merge branch 'corrections'

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• Fix description of RNA pol

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Commits on Nov 4, 2015

• Fix line spacing in list of abbreviations

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• Add missing abbreviations to glossary

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• Use all authors in bibliography

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Commits on Nov 3, 2015

• Move liver dev image up for better text flow

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• Fix alignment of chapter titles and numbers

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• Increase font size of chapter numbers

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Commits on Nov 2, 2015

• Manually fix bad underfull vbox

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• Add links to analysis code repositories

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• Add definition of “purifying selection”

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• Fix missing references

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• John’s corrections

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• Corrections from post-it notes

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• Make chapter numbers lining

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• Fix vertical alignment of chapter numbers

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• Add list of tables

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• Add list of figures

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Commits on Nov 1, 2015

• Incorporate corrections from examiners’ copy

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• Remove obsolete to do note

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• Fix spacing below UofC logo

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• Fix newly added abbreviations

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• Improve future directions of SINE project

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• Add discussiono of chapter 4 results

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• Add discussion section in conclusion

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• Make protein macro species-specific

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Commits on Oct 18, 2015

• Fix RNA-seq schematic

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• Add link to source code

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• Fix EMBL-EBI logo

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• Put proper logos on title page

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Commits on Oct 14, 2015

• Fix glossaries related page headings

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• Add list of abbreviations

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• Add glossaries support to latexmk config

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