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Some channels in PSD plot colors nearly invisible with spatial_colors=True in v1.9.0 #13285

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@Mojackhak

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@Mojackhak

I’ve also encountered the same issue (#6686) with almost white colors when using spatial_colors=True in mne==1.9.0.
As pointed out by bboyth on the MNE Discourse, modifying the _rgb function in
.../env/lib/site-packages/mne/viz/evoked.py helped resolve the issue for me too.

Here’s the modified version of _rgb that worked:

def _rgb(x, y, z):
    """Transform x, y, z values into RGB colors."""
    rgb = np.array([x, y, z]).T
    rgb -= np.nanmin(rgb, 0)
    rgb /= np.maximum(np.nanmax(rgb, 0), 1e-16)  # avoid div by zero
    # Modification to avoid invisible colors:
    # Reduce RGB intensity for overly light colors
    rgb[rgb.sum(axis=1) > 2.5] = rgb[rgb.sum(axis=1) > 2.5] - 0.3
    return rgb

Would it be possible to consider integrating this fix (or a similar safeguard) into a future release?

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