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Commits on Jun 15, 2018

• removed print statements from GetGenomeStats.py

  ryanmelnyk

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• updates to genome assembly pipeline for better QC

  ryanmelnyk

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Commits on Aug 3, 2017

• modified assemble.sh

  ryanmelnyk

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• rename and rewrite for CH409 paper

  ryanmelnyk

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Commits on Dec 6, 2016

• added PlotGenesFromGbk script

  ryanmelnyk

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Commits on Sep 26, 2016

• changed formatting of output fasta headers for Prokka

  ryanmelnyk

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• fixed math.log error for length comparison

  ryanmelnyk

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Commits on Sep 25, 2016

• added length/coverage cutoffs for GetGenomeStats.py

  ryanmelnyk

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• added pbs script for command testing

  ryanmelnyk

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Commits on Sep 23, 2016

• added GetGenomeStats for doing simple length/coverage plot using SPAdes header info

  ryanmelnyk

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• Initial commit

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