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... the sample in three regions according to the FastRed channel: a dark-red ROI, a light-pink ROI and a white ROI.
ANDTool is written in MATLAB (The MathWorks, Inc., Massachusetts, USA) and the source code and standalone versions are here available for download.
USER MANUAL: see the specific PDF available in the Files section.
REQUIREMENTS: MATLAB R2017b and ImageProcessing Toolbox 10.1 or later versions.
MAIN CONTACT: Filippo Piccinini (E-mail: filippo.piccinini85@gmail.com)
... of iText build on the success of previous versions and feature an improved document engine, high and low-level programming capabilities, and a more efficient modular structure. iText represents the next level for developers looking to leverage PDF in document workflows.
The main project page for iText is now on GitHub, and all the latest releases, code samples, open source add-ons and tools, etc. can be found at https://github.com/itext/.
ReViMS, a 3D volume rendering tool for light-sheet/confocal microscopy
... for: (a) segmenting z-stacks of fluorescence images; (b) reconstructing the 3D surface of the aggregates and estimating several features (including the volume).
ReViMS is written in MATLAB (The MathWorks, Inc., Massachusetts, USA). It is an open-source tool and the source code is freely available at: http://sourceforge.net/p/revims
Requirements: MATLAB R2017b and ImageProcessing Toolbox 10.1 or later versions.