Search Results for "pyscripter python 2"
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Showing 2 open source projects for "pyscripter python 2"
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MaryGold
Variation analysis of metagenomic samples
The package enables detection of sequence variation between metagenomic samples. -
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hrefinder
Detection of homologous recombination events from SNP data
This software detects homologous recombination events (HREs) from SNP data. Based on SNP alleles calls and locations, it breaks the genomes into locally colinear blocks, and looks for cases where SNPs do not agree with the vertical pattern of inheritance in a phylogeny. It applies a dynamic programming algorithm to model whether changes within a block are likely a result of mutations, sequencing errors, or HRE. We use information from the nearby SNPs, so that if 1-2 alleles in a series of SNPs...
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