Search Results for "java project with source code" - Page 3

This is a Java-based project for complex event extraction from text and co-reference resolution. Currently the code can read BioNLP shared task format (http://2011.bionlp-st.org/) and i2b2 Natural Language Processing for Clinical Data shared task format (https://www.i2b2.org/NLP/DataSets/Main.php). Event extraction includes finding events and the parameters for an event in a text. The method is based on SVM but other ML algorithms can be adopted. The method details are explained...

A Generalized Combinatorial Approach for Detecting Gene-by-Gene and Gene-by-Environment Interactions

Parsers for biological data based on scanner generators like Flex (C), Re2c(C), Jflex (Java) and Ifickle (Tcl). This scanner generators are providing easier maintainance, development and higher speed than hand written scanners. Scanner output is SQL.

LDIFF is an enhanced language-independent line differencing tool built upon the Unix diff and overcomes its limitations in determining whether an artifact line has been changed or is the result of additions and removals

EPIC is an open source Perl IDE for the Eclipse platform. Features supported are syntax highlighting, on the fly syntax check, content assist, perldoc support, source formatter, templating support, regular expression plugin and a Perl debugger.

This SourceForge page is no longer maintained. To find downloads, source code, or documentation for the PostgreSQL project, please see our home page: http://www.postgresql.org.

This project is abandoned. Download these files at your own risk. For the latest version please visit http://decafbad.net/projects/piddlepodder/ This application is a podcatching client written in Perl. It is based off of the simplicity of bashpodder with a few added features. It downloads podcasts from a list of XML feeds, and puts them into a download directory by date.

A collection of open-source build and release tools, useful for creating and configuring software development, release, and QA production infrastructures.

GWUS stands for grad write up system and is web based software that is designed to allow easy collection of grad write up's and quotes.

DEPRECATED PROJECT! SolexaTools is becoming the SeqWare project (http://seqware.sourceforge.net) to better reflect its expanded sequencer support. Please go to this project page for code and documentation.

DKU is an embedded parallel language, or "piggy-back" language that uses function calls to invoke the language's execution model. It tunes task-size to the hardware while hiding hardware details for high performance portability of parallel code.

This is a project regarding parsing data from different(general) sources and representing it in form of graphs.

Everyday Software for the Researcher of Restricted Means: This project is intended to offer scientists and students with small budgets advanced versions of aqua-built desktop-editing, graphics and statistical applications for MacOSX.

Tracetuner is a tool for base and quality calling of trace files from DNA sequencing instruments. Originally developed by Paracel, a Celera Business, this code base was released as open source in 2006. TraceTuner was used by Celera to call 30+ million reads from both Drosophila and human genome sequencing projects. In 2000, Applied Biosystems bundled TraceTuner with ABI3700 Genome Analyzers and shipped it to the customers of these capillary electrophoresis sequencers. Later versions...

hxRender is a 2D graphics library built around OpenGL for rendering, and may be used with SDL for window setup. It was designed in mind to replace SDL's antiquated rendering methods.

GeneKeyAPI contains two related but independent programs. Updater.GKDB is a robust push-of-a-button updater for GeneKeyDB (GKDB). Bio.GKDB allows the user to easily access elements of GKDB without needing to know the schema or making SQL queries.

Project moved to https://github.com/ivandeex/optikus

Build scripts/wrappers around the YUI Compressor implemented for popular languages like PHP, Python, Java, Bash, Perl, etc. The scripts will track down and compress all JavaScript and CSS files within a given project tree.

Data and animal management software for large-scale phenotype screening Used by GNF for mouse ENU mutagenesis project. Data visualization & analysis, animal husbandry management, & automated QTL mapping. Usable as stand alone animal husbandry system.

FLOSSmole (formerly OSSmole) is a set of tools for gathering metrics and publishing analyses about development of free/libre/open source projects. UPDATE: Our data is now released to Google Code. Please see our new home page at http://flossmole.org

WHT- Recode is a recode of a project called WHT. This is software for maintaining a commercial ( PayPal ) or free webhosting server. Development will be on Debian 6.0

MyJQuery is an operating system independent database utility written entirely in Java, for beginners MySQL 5.1+ Database & students. Generating Perl,Perl/CGI,PHP,Java,JSP Code Snippet & export CSV,HTML,XML execute any MySQL statement

The goal of the GeneText project is the development of a software package that will enable users to dynamically generate an information summary page from multiple sources given a search term. Fields of interest are biology, genetics and bioinformatics.

Emergency Context Resolution with Internet Technologies The project is based on a draft from files draft-ietf-ecrit-* Developed by IETF ECRIT Working Group

This is a customer ticketing system to manage multiple users and customers. Eventually it will be used to do time management manage other aspects of the the customer interaction. This is intended for use with companies providing computer support.