GNAT Code

GNAT recognizes gene names in text and maps them to NCBI Entrez Gene

Commit	Date
[r105] by jhakenberg Added some FPs that often arise after converting PDF to plain text.	2015-08-27 14:08:45	Tree
[r104] by jhakenberg	2015-06-16 20:35:19	Tree
[r103] by jhakenberg	2015-06-03 15:44:06	Tree
[r102] by jhakenberg Added example script to stop a running dictionary server.	2015-06-02 21:10:47	Tree
[r101] by jhakenberg	2015-06-02 21:10:16	Tree
[r100] by jhakenberg Warnings go to STDERR now. Level: 'WARNINGS' and above.	2015-05-28 15:47:52	Tree
[r99] by jhakenberg Work in progress: add methods to let the user update the annotation database. - adding methods to update from Entrez Gene XML and from UniProt KB, see gnat.database.populate.* - MySQL: added stored function ExtractValue_All to help access XML data using XPath. - Some SQL tables changed (column `keywords` now `keyword`); added table GR_Symbols; added UNIQUE constraints on tables, requiring INSERT IGNORE or REPLACE when updating.	2015-05-27 20:57:30	Tree
[r98] by jhakenberg	2015-05-27 19:37:28	Tree
[r97] by jhakenberg New MySQL JAR. (v5.1.28).	2015-05-27 19:34:27	Tree
[r96] by jhakenberg New MySQL JAR. (v5.1.28).	2015-05-27 19:34:09	Tree

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