get_cons: save consensus/quality to disk

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#4 get_cons: save consensus/quality to disk

Status: open

Owner: nobody

Labels: non-interactive (2)

Priority: 5

Updated: 2005-06-20

Created: 2005-06-20

Creator: James Bonfield

Private: No

#
# Usage:
# get_cons db_name contig_identifier ?start end?
#
# This is a simple script to output pad-stripped fasta
files in a format
# usable by cross_match as well as raw data (no headers
or newlines).
# It creates the following files:
#
# <db_name>.cons_<cotnig_name>:<start>-<to>
# <db_name>.cons_<cotnig_name>:<start>-<to>.qual
# <db_name>.cons_<cotnig_name>:<start>-<to>.raw
# <db_name>.cons_<cotnig_name>:<start>-<to>.raw.qual
#

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James Bonfield - 2005-06-20

get_cons

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get_cons: save consensus/quality to disk

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#4 get_cons: save consensus/quality to disk

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