INTEGRATE: Calling gene fusions with exact fusion junctions and genomic breakpoints by combining RNA-Seq and WGS data.

To download source code, reference manual and test case, please go to 'Files'.

Also refer to 'Wiki' for details.

Features

  • High sensitivity and specificity
  • Exact fusion junctions and genomic breakpoints
  • Fast split-read mapping algorithm based on Burrows-Wheeler transform

Project Samples

INTEGRATE Screenshot 1

Project Activity

See All Activity >

Categories

Bio-Informatics

License

GNU General Public License version 3.0 (GPLv3)

Follow INTEGRATE

INTEGRATE Web Site

Other Useful Business Software
Build Securely on Azure with Proven Frameworks Icon
Build Securely on Azure with Proven Frameworks

Lay a foundation for success with Tested Reference Architectures developed by Fortinet’s experts. Learn more in this white paper.

Moving to the cloud brings new challenges. How can you manage a larger attack surface while ensuring great network performance? Turn to Fortinet’s Tested Reference Architectures, blueprints for designing and securing cloud environments built by cybersecurity experts. Learn more and explore use cases in this white paper.
Download Now
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of INTEGRATE!

Additional Project Details

Registered

2014-05-09
Report inappropriate content