GSP program are based on Bayesian framework with an EM algorithm to predict genome size iteratively, which is elegant in mathematics. The model first develop under the no sequencing error model, then extend to the sequencing errors containing model.

Features

  • fast calculate the K-mer frequency of the genome size
  • the EM iterative algorithm for the genome size predition
  • extra error model for real data

Project Activity

See All Activity >

License

GNU General Public License version 3.0 (GPLv3)

Follow GSP: genome size prediction software

GSP: genome size prediction software Web Site

Other Useful Business Software
Get the most trusted enterprise browser Icon
Get the most trusted enterprise browser

Advanced built-in security helps IT prevent breaches before they happen

Defend against security incidents with Chrome Enterprise. Create customizable controls, manage extensions and set proactive alerts to keep your data and employees protected without slowing down productivity.
Download Chrome
Rate This Project
Login To Rate This Project

User Ratings

5.0 out of 5 stars
★★★★★
★★★★
★★★
★★
★
1
0
0
0
0
ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
design 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
support 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5

User Reviews

Filter Reviews:
All
  • akka9981 Posted 2012-11-28
    rename the GSP project to the smartGS
Read more reviews >

Additional Project Details

Operating Systems

BSD, Cygwin, IBM AIX, Linux

Languages

English

User Interface

Command-line

Programming Language

C

Registered

2009-12-14
Report inappropriate content