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Add draft files from SK website
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‎CNAME‎

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seankavanagh.com

‎Gemfile‎

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@@ -4,6 +4,7 @@ group :jekyll_plugins do
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gem 'jekyll'
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gem 'jekyll-feed'
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gem 'jekyll-sitemap'
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gem 'jekyll-twitter-plugin'
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gem 'jekyll-redirect-from'
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gem 'jemoji'
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gem 'webrick', '~> 1.8'

‎_config.yml‎

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# This config file is meant for settings that affect your entire site, values
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# which you are expected to set up once and rarely need to edit after that.
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# For technical reasons, this file is *NOT* reloaded automatically when you use
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# `jekyll serve -l -H localhost`. If you change this file, please restart the
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# `jekyll serve -l -H localhost`. If you change this file, please restart the
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# server process.
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# Basic Site Settings
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locale : "en-US"
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site_theme : "default" # Currently available options are "default", "air"
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title : "Your Name / Site Title"
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# Site Settings
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locale : "en-UK"
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site_theme : "default" # Currently available options are "default", "air"
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# TODO: try air
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title : "Seán R. Kavanagh"
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title_separator : "-"
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name : &name "Your Name"
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description : &description "Your Name's academic portfolio" # Update this with a general description of your site, this is the default if not overridden by a page
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url : https://academicpages.github.io # The base hostname & protocol for your site e.g. "https://[your GitHub username].github.io",
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name : &name "Seán R. Kavanagh"
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description : &description "SAM Lab" # TODO
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# description : &description "Incoming Assistant Professor in Simulation of Energy Materials" # Update this with a general description of your site, this is the default if not overridden by a page
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url : https://kavanase.github.io # The base hostname & protocol for your site e.g. "https://[your GitHub username].github.io",
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# or if you already have some other page hosted on Github then use "https://[your GitHub username].github.io/[Your Repo Name]"
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baseurl : "" # the subpath of your site, e.g. "/blog"
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repository : "academicpages/academicpages.github.io"
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repository : "kavanase/kavanase.github.io"
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# Site Author - The following control what appear as part of the author content on the side bar.
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# If a field is blank the icon and link will not appear, otherwise it will be shown.
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# Additional customization can be done by editing /_includes/author-profile.html
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author:
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# Biographic information
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avatar : "profile.png"
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name : "Your Sidebar Name"
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pronouns : # example: "she/her"
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bio : "Short biography for the left-hand sidebar"
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location : "Earth"
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employer : "Red Brick University"
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uri : # URL
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email : "[email protected]"
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avatar : "profile.jpg"
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name : "Seán R. Kavanagh"
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pronouns : # example: "she/her"
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bio : "Incoming Assistant Professor in Energy Materials Modelling, at the University of Cambridge."
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location : "Cambridge, MA"
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employer : "Harvard University"
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uri : "https://seankavanagh.com"
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email : "[email protected]"
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# Academic websites
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academia : # URL
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arxiv : # URL - Update with the correct link to your profile
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googlescholar : "https://scholar.google.com/citations?user=PS_CX0AAAAAJ"
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arxiv : "http://arxiv.org/a/kavanagh_s_1"
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googlescholar : "https://bit.ly/3pBMxOG"
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impactstory : # URL
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orcid : "http://orcid.org/yourorcidurl"
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orcid : "https://orcid.org/0000-0003-4577-9647"
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semantic : # URL
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pubmed : "https://www.ncbi.nlm.nih.gov/pubmed/?term=john+snow"
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researchgate : # URL
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pubmed : # URL
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researchgate : "https://www.researchgate.net/profile/Sean-Kavanagh-3"
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scopus : # URL
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# Repositories and software development
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bitbucket : # Username - Update with your username on the site
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codepen : # Username
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dribbble : # Username
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github : "academicpages"
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kaggle : # Username
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stackoverflow : # User number or user number and name (i.e., use "1" or "1/jeff-atwood")
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github : "kavanase"
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kaggle : # Username
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stackoverflow : # User number or user number and name (i.e., use "1" or "1/jeff-atwood")
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# Social media
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artstation : # Username
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bluesky : "bsky.app" # Replace this with you Bluesky username
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bluesky : "kavanaghsean.bsky.social"
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facebook : # Username
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flickr : # Username
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foursquare : # Username
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keybase : # Username
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instagram : # Username
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lastfm : # Username
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linkedin : # Username
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linkedin : "seankav" # "https://www.linkedin.com/in/seankav/"
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mastodon : # URL
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medium : # URL
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pinterest : # Username
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soundcloud : # Username
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speakerdeck : "http://speakerdeck.com/kavanase"
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steam : # Username
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telegram : # URL
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tumblr : # Username
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twitter : # Username for X / Twitter
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twitter : "Kavanagh_Sean_"
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vine : # Username
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weibo : # Username
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wikipedia : # Username
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xing : # Username
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youtube : # Username
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youtube : "SeánRKavanagh" # "https://bit.ly/2U5YgLf"
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zhihu : # Username
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# Publication Category - The following the list of publication categories and their headings
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publication_category:
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books:
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title: 'Books'
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manuscripts:
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title: 'Journal Articles'
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conferences:
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title: 'Conference Papers'
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# Site Settings
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teaser : # filename of teaser fallback teaser image placed in /images/ for social media previews
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breadcrumbs : false # true, false (default)
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# Analytics
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analytics:
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provider : "false" # false (default), "google", "google-universal", "google-analytics-4", "custom"
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google:
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tracking_id :
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provider : "google-universal" # "google-universal" # false (default), "google", "google-universal",
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google-universal:
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tracking_id : "UA-209686073-1"
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google-analytics:
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tracking_id : "G-KRWNYS3Y9G"
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# Reading Files
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publications:
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output: true
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permalink: /:collection/:path/
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portfolio:
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output: true
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permalink: /:collection/:path/
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talks:
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output: true
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permalink: /:collection/:path/
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toc: true
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# These settings control how pages and collections are included in the site
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defaults:
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comments: true
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share: true
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related: true
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toc: true
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# _pages
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- scope:
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path: ""
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permalink: /:categories/:title/
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# paginate: 5 # amount of posts to show
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# paginate_path: /page:num/
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timezone: Etc/UTC # http://en.wikipedia.org/wiki/List_of_tz_database_time_zones
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timezone: Europe/Dublin # http://en.wikipedia.org/wiki/List_of_tz_database_time_zones
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# Plugins
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- jekyll-sitemap
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- jekyll-redirect-from
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- jemoji
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- jekyll-remote-theme
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# Mimic GitHub Pages with --safe
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whitelist:

‎_data/navigation.yml‎

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main:
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- title: "Publications"
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url: /publications/
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url: https://scholar.google.com/citations?user=P-7ICrQAAAAJ&hl=en
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target: "_blank"
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- title: "Talks"
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url: /talks/
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# - title: "Talks"
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# url: /talks/ # just do CV
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- title: "Teaching"
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url: /teaching/
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- title: "Portfolio"
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url: /portfolio/
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- title: "Blog Posts"
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url: /year-archive/
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# - title: "Awards" # unnecessary
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# url: /awards/
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# - title: "Teaching" # unnecessary
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# url: /teaching/
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- title: "Software"
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url: https://github.com/kavanase
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target: "_blank"
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- title: "CV"
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url: /cv/
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# - title: "CV"
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# url: /cv-json/
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url: https://kavanase.github.io/files/Sean_Kavanagh_CV.pdf
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target: "_blank"
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- title: "Guide"
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url: /markdown/
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# - title: "Links" # redundant
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# url: /links/

‎_includes/analytics.html‎

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{% include /analytics-providers/google-analytics-4.html %}
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{% when "custom" %}
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{% include /analytics-providers/custom.html %}
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{% when "google-analytics" %}
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{% include /analytics-providers/google-analytics.html %}
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{% endcase %}
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{% endif %}
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{% endif %}

‎_includes/author-profile.html‎

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{% endif %}
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{% if author.arxiv %}
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<li><a href="{{ author.arxiv }}"><i class="ai ai-arxiv ai-fw icon-pad-right"></i>arXiv</a></li>
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{% endif %}
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{% endif %}
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{% if author.googlescholar %}
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<li><a href="{{ author.googlescholar }}"><i class="ai ai-google-scholar ai-fw icon-pad-right"></i>Google Scholar</a></li>
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{% endif %}
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{% endif %}
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{% if author.pubmed %}
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<li><a href="{{ author.pubmed }}"><i class="ai ai-pubmed ai-fw icon-pad-right"></i>PubMed</a></li>
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{% endif %}
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{% endif %}
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{% if author.researchgate %}
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<li><a href="{{ author.researchgate }}"><i class="fab fa-fw fa-researchgate icon-pad-right" aria-hidden="true"></i>ResearchGate</a></li>
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{% endif %}
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{% endif %}
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{% if author.codepen %}
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<li><a href="https://codepen.io/{{ author.codepen }}"><i class="fab fa-fw fa-codepen icon-pad-right" aria-hidden="true"></i>CodePen</a></li>
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{% endif %}
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{% endif %}
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{% if author.dribbble %}
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<li><a href="https://dribbble.com/{{ author.dribbble }}"><i class="fab fa-fw fa-dribbble icon-pad-right" aria-hidden="true"></i>Dribbble</a></li>
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{% endif %}
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{% endif %}
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{% if author.github %}
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<li><a href="https://github.com/{{ author.github }}"><i class="fab fa-fw fa-github icon-pad-right" aria-hidden="true"></i>GitHub</a></li>
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{% endif %}
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{% if author.kaggle %}
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<li><a href="https://kaggle.com/{{ author.kaggle }}"><i class="fab fa-fw fa-kaggle icon-pad-right" aria-hidden="true"></i>Kaggle</a></li>
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{% endif %}
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{% endif %}
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{% if author.stackoverflow %}
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<li><a href="https://www.stackoverflow.com/users/{{ author.stackoverflow }}"><i class="fab fa-fw fa-stack-overflow icon-pad-right" aria-hidden="true"></i>Stackoverflow</a></li>
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{% endif %}
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{% endif %}
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<!-- Font Awesome icons / Social media -->
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{% if author.artstation %}
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{% endif %}
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{% if author.flickr %}
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<li><a href="https://www.flickr.com/{{ author.flickr }}"><i class="fab fa-fw fa-flickr icon-pad-right" aria-hidden="true"></i>Flickr</a></li>
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{% endif %}
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{% endif %}
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{% if author.foursquare %}
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<li><a href="https://foursquare.com/{{ author.foursquare }}"><i class="fab fa-fw fa-foursquare icon-pad-right" aria-hidden="true"></i>Foursquare</a></li>
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{% endif %}
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{% if author.goodreads %}
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<li><a href="https://www.goodreads.com/{{ author.goodreads }}"><i class="fab fa-fw fa-goodreads icon-pad-right" aria-hidden="true"></i>Goodreads</a></li>
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{% endif %}
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{% endif %}
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{% if author.google_plus %}
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<li><a href="https://plus.google.com/+{{ author.google_plus }}"><i class="fab fa-fw fa-google-plus-g icon-pad-right" aria-hidden="true"></i>Google+</a></li>
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{% endif %}
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{% endif %}
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{% if author.keybase %}
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<li><a href="https://keybase.io/{{ author.keybase }}"><i class="fas fa-fw fa-key icon-pad-right" aria-hidden="true"></i>Keybase</a></li>
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{% endif %}
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{% if author.instagram %}
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<li><a href="https://instagram.com/{{ author.instagram }}"><i class="fab fa-fw fa-instagram icon-pad-right" aria-hidden="true"></i>Instagram</a></li>
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{% endif %}
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{% endif %}
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{% if author.lastfm %}
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<li><a href="https://last.fm/user/{{ author.lastfm }}"><i class="fab fa-fw fa-lastfm icon-pad-right" aria-hidden="true"></i>Last.fm</a></li>
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{% endif %}
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{% endif %}
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{% if author.linkedin %}
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<li><a href="https://www.linkedin.com/in/{{ author.linkedin }}"><i class="fab fa-fw fa-linkedin icon-pad-right" aria-hidden="true"></i>LinkedIn</a></li>
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{% endif %}
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{% endif %}
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{% if author.mastodon %}
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<li><a href="{{ author.mastodon }}"><i class="fab fa-fw fa-mastodon icon-pad-right" aria-hidden="true"></i>Mastodon</a></li>
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{% endif %}
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{% if author.medium %}
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<li><a href="{{ author.medium }}"><i class="fab fa-fw fa-medium icon-pad-right" aria-hidden="true"></i>Medium</a></li>
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{% endif %}
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{% endif %}
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{% if author.pinterest %}
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<li><a href="https://www.pinterest.com/{{ author.pinterest }}"><i class="fab fa-fw fa-pinterest icon-pad-right" aria-hidden="true"></i>Pinterest</a></li>
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{% endif %}
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{% endif %}
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{% if author.soundcloud %}
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<li><a href="https://soundcloud.com/{{ author.soundcloud }}"><i class="fab fa-fw fa-soundcloud icon-pad-right" aria-hidden="true"></i>Soundcloud</a></li>
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{% endif %}
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{% endif %}
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{% if author.steam %}
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<li><a href="https://steamcommunity.com/id/{{ author.steam }}"><i class="fab fa-fw fa-steam icon-pad-right" aria-hidden="true"></i>Steam</a></li>
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{% endif %}
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{% if author.telegram %}
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<li><a href="{{ author.telegram }}"><i class="fab fa-fw fa-telegram icon-pad-right" aria-hidden="true"></i>Telegram</a></li>
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{% endif %}
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{% endif %}
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{% if author.tumblr %}
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<li><a href="https://{{ author.tumblr }}.tumblr.com"><i class="fab fa-fw fa-tumblr icon-pad-right" aria-hidden="true"></i>Tumblr</a></li>
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{% endif %}
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{% endif %}
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{% if author.twitter %}
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<li><a href="https://twitter.com/{{ author.twitter }}"><i class="fab fa-fw fa-x-twitter icon-pad-right" aria-hidden="true"></i>X (formerly Twitter)</a></li>
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{% endif %}
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{% if author.vine %}
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<li><a href="https://vine.co/u/{{ author.vine }}"><i class="fab fa-fw fa-vine icon-pad-right" aria-hidden="true"></i>Vine</a></li>
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{% endif %}
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{% endif %}
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{% if author.weibo %}
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<li><a href="https://www.weibo.com/{{ author.weibo }}"><i class="fab fa-fw fa-weibo icon-pad-right" aria-hidden="true"></i>Weibo</a></li>
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{% endif %}
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{% if author.wikipedia %}
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<li><a href="https://en.wikipedia.org/wiki/User:{{ author.wikipedia }}"><i class="fab fa-fw fa-wikipedia-w icon-pad-right" aria-hidden="true"></i>Wikipedia</a></li>
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{% endif %}
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{% endif %}
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{% if author.xing %}
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<li><a href="https://www.xing.com/profile/{{ author.xing }}"><i class="fab fa-fw fa-xing icon-pad-right" aria-hidden="true"></i>XING</a></li>
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{% endif %}
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{% if author.speakerdeck %}
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<li><a href="{{ author.speakerdeck }}"><i class="fab fa-fw fa-slideshare icon-pad-right" aria-hidden="true"></i>SpeakerDeck</a></li>
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{% endif %}
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{% if author.youtube %}
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<li><a href="https://www.youtube.com/@{{ author.youtube }}"><i class="fab fa-fw fa-youtube icon-pad-right" aria-hidden="true"></i>YouTube</a></li>
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<li><a href="https://www.youtube.com/c/{{ author.youtube }}"><i class="fab fa-fw fa-youtube icon-pad-right" aria-hidden="true"></i>YouTube</a></li>
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{% endif %}
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{% if author.zhihu %}
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<li><a href="https://www.zhihu.com/people/{{ author.zhihu }}"><i class="fab fa-fw fa-zhihu icon-pad-right" aria-hidden="true"></i>Zhihu</a></li>
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{% endif %}
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{% endif %}
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</ul>
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</div>
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</div>

‎_includes/footer.html‎

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<div class="page__footer-copyright">
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&copy; {{ site.time | date: '%Y' }} {{ site.name | default: site.title }}, {{ site.data.ui-text[site.locale].powered_by | default: "Powered by" }} <a href="http://jekyllrb.com" rel="nofollow">Jekyll</a> &amp; <a href="https://github.com/academicpages/academicpages.github.io">AcademicPages</a>, a fork of <a href="https://mademistakes.com/work/minimal-mistakes-jekyll-theme/" rel="nofollow">Minimal Mistakes</a>.<br />
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Site last updated {{ "now" | date: '%Y-%m-%d' }}
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Site last updated {{ "now" | date: '%Y-%m-%d' %}}
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</div>
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<!-- Default Statcounter code for SeanKavanagh.com
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https://www.seankavanagh.com -->
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<script type="text/javascript">
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var sc_project=12647461;
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var sc_invisible=1;
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var sc_security="b0256277";
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</script>
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<script type="text/javascript"
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src="https://www.statcounter.com/counter/counter.js"
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async></script>
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<noscript><div class="statcounter"><a title="Web Analytics"
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href="https://statcounter.com/" target="_blank"><img
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class="statcounter"
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src="https://c.statcounter.com/12647461/0/b0256277/1/"
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alt="Web Analytics"
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referrerPolicy="no-referrer-when-downgrade"></a></div></noscript>
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<!-- End of Statcounter Code -->

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