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AI for Science 🚀🌘

11 repositories
Jupyter Notebook 380 66 Updated Nov 23, 2025
Jupyter Notebook 675 167 Updated Dec 18, 2024

Flow & mass cytometry analytics.

Python 58 13 Updated Dec 22, 2025

Segment Anything for Microscopy

Jupyter Notebook 626 88 Updated Dec 23, 2025

Single-cell perturbation analysis

Python 225 40 Updated Dec 22, 2025

GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations

Python 322 74 Updated Feb 1, 2025

Interpretation of cell states using reference single-cell maps

R 302 32 Updated Dec 19, 2025

CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.

Jupyter Notebook 453 60 Updated Jun 6, 2025

This repository contains all code used for the Human Lung Cell Atlas project.

Jupyter Notebook 57 15 Updated Aug 21, 2023

Metacells - Single-cell RNA Sequencing Analysis

Python 116 8 Updated Sep 27, 2024

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

Python 3,236 647 Updated Dec 16, 2025