Lib.rs

align-cli

A command line interface for easily aligning sequences

toxannotator

tox annotator for ToxDB

gdock

Fast information-driven protein-protein docking using genetic algorithms and physics-based scoring

proteogenomics

dihardts_omicstools

Collection of different omic tools, structs and enums

pdbtbx

open/edit/save (crystallographic) Protein Data Bank (PDB) and mmCIF files

pepterm

View protein structures in your terminal with beautiful color gradients

pdbrust

A comprehensive Rust library for parsing and analyzing Protein Data Bank (PDB) files

nucleob

bioinformatics: nucleobases and amino acids statistics

proteinogenic

Chemical structure generation for protein sequences as SMILES string

nom-pdb

PDB parser implemented with nom

frag_gene_scan_rs

gene prediction model for short and error-prone reads

heme

PDB reader and other protein modeling tools

uniparc_xml_parser

Scripts for parsing UniParc XML files downloaded from the Uniprot website into CSV files

protein-translate

Translate nucleotide sequence to protein

jean_blosum

BLOSUM feature for jean

prot_translate

Translate nucleotide sequence to protein

freesasa-sys

Rust raw FFI bindings for the freesasa C library

pdb-handler

functions to handle PDB files

jean

Computational biology utility library for Rust featuring sequence alignment, genome annotation, and I/O of biological files

census2csv

Convert TMT multiplexed proteomics data in the Census format to CSV files

miniprot-sys

Bindings to libminiprot

pdbvis

A 3D protein structure viewer that loads and visualizes proteins from the Protein Data Bank (PDB)

rust-spoa

wraps the C++ SPOA library for generating DNA and protein consensus sequences

protein_translation

translate &str or String of RNA sequence with nucleotide into a Vec<&str> of their appropriate protein names

multi-seq-align

Manipulate multiple sequence alignments (DNA/protein)

jean_io

I/O library feature for jean

protein

Working with protein structures

jean_cut

Codon usage tables feature for jean

jean_macros

Macro library feature for jean

ring_api

Strongly-typed client for the RING HTTP API

jean_alignment

Sequence alignment feature for jean

tofu-img

Press a bunch of photos together until they become a big protein blob

rget_pdb

Download Protein files from rcsb.org

molcv

that calculates the circular variance of protein residues

global-supertrees

A package containing code for generating global supertrees from protein alignment trees

protein-get

Working with protein structures

jean_core

Core package of jean

biodata-parsers

Scripts for parsing UniParc XML files downloaded from the Uniprot website into CSV files

protein-io

Parsers for common protein structure file formats

protein-analysis

Protein analysis