Technical requirements
We will use renv to manage packages in a project-specific way. To use renv to install packages, you will first need to install the renv package. You can do this by running the following commands in your R console:
Install renv:
install.packages("renv") Create a new renv environment:
renv::init()
This will create a new directory called .renv in your current project directory.
You can then install packages with the following:
renv::install_packages()
You can also use the renv package manager to install Bioconductor packages by running the following command:
renv::install("bioc::package name") For example, to install the Biobase package, you would run the following:
renv::install("bioc::Biobase") You can use renv to install development packages from GitHub like this:
renv::install("user name/repo name") For example, to install the danmaclean user rbioinfcookbook package, you would run the...
