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The harder the task, the smaller the first step should be.
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The harder the task, the smaller the first step should be.

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OccupyMars2025/README.md

6

7, 8

9, 10, 11, 12

欲文明其精神,先自野蛮其体魄


newest personal records

2025/6/1 6:09-8:21: run a half marathon in 1:51:53

2025/6/1: 20 pull-ups in a row

2025/6/1: 30 push-ups in a row


Current progress:

2025/5/30 7:00 - 6/3 23:00 : study the paper of AlphaFold 3: Accurate structure prediction of biomolecular interactions with AlphaFold 3

2025/5/31: {"push ups + Mountain Climbers": 460}, {"cartwheels": 100 meters}, {"running": 5km}
2025/5/31 6:46-7:37: section "Network architecture and training"
2025/5/31 7:37-10:12: section "Accuracy across complex types"
2025/5/31 10:12-13:08: section "Predicted confidences track accuracy"
2025/5/31 13:08-14:29: section "Model limitations"
2025/5/31 14:29-14:57: section "Discussion"

Let’s tackle the hardest part now—this is the core and most challenging section of the paper.
2025/5/31 14:57-: section "Methods"
2025/5/31 14:57-: Full algorithm details, Supplementary information(https://static-content.springer.com/esm/art%3A10.1038%2Fs41586-024-07487-w/MediaObjects/41586_2024_7487_MOESM1_ESM.pdf), 45 pages in total
2025/5/31 14:57-15:50: 1 Notation
2025/5/31 16:30-17:00: run 5km in 28min
2025/5/31 20:27-23:49: 2.1 Parsing(To be continued)


2025/6/1: {"push ups + Mountain Climbers": 110}, {"cartwheels": 0}, {"running": 21km}, {"pull ups +  Parallel Bar Dips": 100}
2025/6/1 6:09-8:21: run a half marathon in 1:51:53
2025/6/1 13:20-23:30: 2.1 Parsing

2025/6/2: {"pull ups +  Parallel Bar Dips": 300}
2025/6/2 6:45-7:06: 2.1 Parsing
2025/6/2 9:04-16:50 (Very sleepy, low efficiency): 2.2 Genetic search

2025/6/3 6:48-: 2.2 Genetic search


Goals 2025/5/30 - 6/20:

0. Run 10km in 40 minutes, run a half marathon in 1 hour and 30 minutes, do 300 push-ups in a row, do 50 pull-ups in a row

1. Complete the study of all papers and source codes related to AlphaFold 2&3


Go Navy, Beat Army !

Go Army, Sink Navy !

Every Engineer is an Athlete

Swimming across the Pacific Ocean

Swimming across the Arctic Ocean

An engineer who doesn’t aspire to be an Olympic champion isn’t a qualified engineer.

破釜沉舟

History has shown that many great victories were achieved not by those who kept an escape route open, but by those who burned the bridges behind them, forcing themselves to advance against all odds.

goku

Pinned Loading

  1. ColabFold ColabFold Public

    Forked from sokrypton/ColabFold

    Making Protein folding accessible to all!

    Jupyter Notebook

  2. alphafold3-pytorch alphafold3-pytorch Public

    Forked from lucidrains/alphafold3-pytorch

    Implementation of Alphafold 3 from Google Deepmind in Pytorch

    Python

  3. openfold openfold Public

    Forked from aqlaboratory/openfold

    Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

    Python

  4. google-deepmind-alphafold3 google-deepmind-alphafold3 Public

    Forked from google-deepmind/alphafold3

    AlphaFold 3 inference pipeline.

    Python

  5. evo2 evo2 Public

    Forked from ArcInstitute/evo2

    Genome modeling and design across all domains of life

    Jupyter Notebook

  6. Protenix Protenix Public

    Forked from bytedance/Protenix

    A trainable PyTorch reproduction of AlphaFold 3.

    Python