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Vs 1619 #9196

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Merged
merged 18 commits into from
Jun 10, 2025
Merged

Vs 1619 #9196

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c0fbb30
Didn't push last changes?
koncheto-broad Apr 28, 2025
a108446
updates to pipe correct references to the right places
koncheto-broad Apr 30, 2025
50b2c64
passing through ref version correctly to ExtractTask
koncheto-broad Apr 30, 2025
d3c824f
Modifying PopulateFilterSetInfo task to handle custom references
koncheto-broad May 6, 2025
4b5c6bb
Modifying PopulateFilterSetInfo task to handle custom references... b…
koncheto-broad May 8, 2025
89a52a7
Updating the next GATK Tool
koncheto-broad May 8, 2025
c3a9103
Caught the last hg38 issue... I think
koncheto-broad May 9, 2025
12e376a
exposing a few wdls to dockstore for review
koncheto-broad May 15, 2025
ab9462b
exposing a few wdls to dockstore for review
koncheto-broad May 15, 2025
2c5f42d
merging in ah_var_store changes
koncheto-broad Jun 2, 2025
278d753
pushing integration wdl to dockstore
koncheto-broad Jun 5, 2025
ecb2953
going to explictly try to add the vcf integraiton, as the other one i…
koncheto-broad Jun 5, 2025
c762765
empty line lurking in dockstore
koncheto-broad Jun 5, 2025
3fbe99f
Merge branch 'gvs_expanded_references' into VS-1619
koncheto-broad Jun 6, 2025
d72c5f0
merging ah_var_store in
koncheto-broad Jun 9, 2025
436caab
normalizing with ah_var_store yet again to simplify the pr
koncheto-broad Jun 10, 2025
84c76ad
Getting rid of unnecessary argument in task
koncheto-broad Jun 10, 2025
01f5c93
a nit that, frankly, would have bothered me if I noticed it too
koncheto-broad Jun 10, 2025
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exposing a few wdls to dockstore for review
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@koncheto-broad
koncheto-broad committed May 15, 2025
commit 12e376a35745ef5f99b9c2a1631565ba0215244d
1 change: 1 addition & 0 deletions .dockstore.yml
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Expand Up @@ -175,6 +175,7 @@ workflows:
branches:
- master
- ah_var_store
- VS-1619
tags:
- /.*/
- name: GvsImportGenomes
Expand Down