A pipeline to transfer the Nanopore reads to end users

1. Push button 2. Get results 3. Publish

Discovery of communities in Pore-C concatemers

demultiplexing pipeline

a list of custom contaminants.

Tools to process and analyze deep sequencing data.

Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/

Practical Python Programming (course by @dabeaz)

Fork of Pore-C-Snakemake for running on the MPI cluster

We developed a protocol of in situ high throughput multi-way contact long read Pore-C sequencing (in situ HiPore-C), a strategy that integrated multi-fragment ligates preparation with third-generat…

Customizable workflows based on snakemake and python for the analysis of NGS data

Full-Length Alternative Isoform analysis of RNA

Pore-C support

DeepMP is a computational tool to detect DNA modifications in Nanopore sequencing data