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Code related to article "Papillary Thyroid Carcinoma: A thorough Bioinformatic Analysis of Gene Expression and Clinical data"

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icic-uns-conicet/PTC-GeneExpAnalysis

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Genes2022

Code for manuscript "Papillary Thyroid Carcinoma: A thorough Bioinformatic Analysis of Gene Expression and Clinical data"

Scripts should be run in the following order:

GSE29265.R

GSE33630.R

TCGA_THCA.R

comparison.R

comparison_2.R

RFE.R

TCGA data is stored in "TCGA data" folder in the repository. You have to download all the included files manually since they are ignored by -gitignore file; given the size of one of the files. You should download manually, and put into a "TCGA data"" folder so they can be accessed from the script.

R.Version() $platform [1] "x86_64-apple-darwin17.0"

$arch [1] "x86_64"

$os [1] "darwin17.0"

$system [1] "x86_64, darwin17.0"

$status [1] ""

$major [1] "4"

$minor [1] "2.1"

$year [1] "2022"

$month [1] "06"

$day [1] "23"

$svn rev [1] "82513"

$language [1] "R"

$version.string [1] "R version 4.2.1 (2022-06-23)"

$nickname [1] "Funny-Looking Kid"

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Code related to article "Papillary Thyroid Carcinoma: A thorough Bioinformatic Analysis of Gene Expression and Clinical data"

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