a python bioinformatics framework

Optional static typing for Python

Pysam is a python module for reading and manipulating Samfiles. It's a lightweight wrapper of the samtools C-API. Pysam also includes an interface for tabix.

Apache Airflow - A platform to programmatically author, schedule, and monitor workflows

Data validation using Python type hints

Workflow Description Language developer tools & local runner

Tools for handling Unique Molecular Identifiers in NGS data sets

Introduction to Python for non-programmers using gapminder data

Correct mismatches, microindels, and noncanonical splice junctions in long reads that have been mapped to the genome

Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)

Jekyll theme based on Grayscale Start Bootstrap theme