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1. hictk hictk Public

   Blazing fast toolkit to work with .hic and .cool files

   C++ 29 1

2. hictkpy hictkpy Public

   Python bindings for hictk: read and write .cool and .hic files directly from Python

   C++ 15

3. StripePy StripePy Public

   StripePy recognizes architectural stripes in 3C and Hi-C contact maps using geometric reasoning

   Python 6 3

4. modle modle Public

   High-performance stochastic modeling of DNA loop extrusion interactions

   C++ 17 2

5. hictkR hictkR Public

   R bindings for hictk: read .cool and .hic files directly from R

   C++ 4