[bug] close 94. runShadow depends on installShadowApp.

[misc] update version for release

[misc] update version for release

update version for release

udpated README

update README

close GradleUp#53, do not create source remapped dirs, create dest re…

…mapped dirs

0.9.0-M5 and add commons-io dependency

do not handle transitives

closes issue 49, calculate file name correctly on windows