A curated list of awesome R frameworks, libraries and software.
- cxli233/FriendsDontLetFriends - Friends don't let friends make certain types of data visualization - What are they and why are they bad.
- tidyverse/ggplot2 - An implementation of the Grammar of Graphics in R
- qinwf/awesome-R - A curated list of awesome R packages, frameworks and software.
- rstudio/shiny - Easy interactive web applications with R
- tidyverse/dplyr - dplyr: A grammar of data manipulation
- hadley/r4ds - R for data science: a book
- swirldev/swirl_courses - 🎓 A collection of interactive courses for the swirl R package.
- rmcelreath/stat_rethinking_2022 - Statistical Rethinking course winter 2022
- Rdatatable/data.table - R's data.table package extends data.frame:
- twitter/AnomalyDetection - Anomaly Detection with R
- rstudio/rmarkdown - Dynamic Documents for R
- plotly/plotly.R - An interactive graphing library for R
- r-lib/devtools - Tools to make an R developer's life easier
- satijalab/seurat - R toolkit for single cell genomics
- yihui/knitr - A general-purpose tool for dynamic report generation in R
- rmcelreath/stat_rethinking_2023 - Statistical Rethinking Course for Jan-Mar 2023
- rmcelreath/rethinking - Statistical Rethinking course and book package
- tylermorganwall/rayshader - R Package for 2D and 3D mapping and data visualization
- rstudio/gt - Easily generate information-rich, publication-quality tables from R
- IndrajeetPatil/ggstatsplot - Enhancing {ggplot2} plots with statistical analysis 📊📣
- ujjwalkarn/DataScienceR - a curated list of R tutorials for Data Science, NLP and Machine Learning
- karthik/wesanderson - A Wes Anderson color palette for R
- szilard/benchm-ml - A minimal benchmark for scalability, speed and accuracy of commonly used open source implementations (R packages, Python scikit-learn, H2O, xgboost, Spark MLlib etc.) of the top machine learning algorithms for binary classification (random forests, gradient boosted trees, deep neural networks etc.).
- dreamRs/esquisse - RStudio add-in to make plots interactively with ggplot2
- rstudio/blogdown - Create Blogs and Websites with R Markdown
- google/CausalImpact - An R package for causal inference in time series
- tidyverse/tidyverse - Easily install and load packages from the tidyverse
- rich-iannone/DiagrammeR - Graph and network visualization using tabular data in R
- rstudio/reticulate - R Interface to Python
- mlr-org/mlr - Machine Learning in R
- geocompx/geocompr - Geocomputation with R: an open source book
- topepo/caret - caret (Classification And Regression Training) R package that contains misc functions for training and plotting classification and regression models
- bbc/bbplot - R package that helps create and export ggplot2 charts in the style used by the BBC News data team
- EmilHvitfeldt/r-color-palettes - Comprehensive list of color palettes available in R ❤️🧡💛💚💙💜
- tidyverse/rvest - Simple web scraping for R
- tidymodels/broom - Convert statistical analysis objects from R into tidy format
- rstudio/plumber - Turn your R code into a web API.
- sfirke/janitor - simple tools for data cleaning in R
- tidyverse/tidyr - Tidy Messy Data
- r-spatial/sf - Simple Features for R
- griffithlab/rnaseq_tutorial - Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
- hadley/mastering-shiny - Mastering Shiny: a book
- ropensci/drake - An R-focused pipeline toolkit for reproducibility and high-performance computing
- rstudio/tensorflow - TensorFlow for R
- paul-buerkner/brms - brms R package for Bayesian generalized multivariate non-linear multilevel models using Stan
- tidyverse/purrr - A functional programming toolkit for R
- hrbrmstr/hrbrthemes - 🔏 Opinionated, typographic-centric ggplot2 themes and theme components
- mitchelloharawild/vitae - R Markdown Résumés and CVs
- r-lib/lintr - Static Code Analysis for R
- juliasilge/tidytext - Text mining using tidy tools ✨📄✨
- wch/r-source - Read-only mirror of R source code from https://svn.r-project.org/R/, updated hourly. See the build instructions on the wiki page.
- swirldev/swirl - 🌀 Learn R, in R.
- BlakeRMills/MetBrewer - Color palette package in R inspired by works at the Metropolitan Museum of Art in New York
- robjhyndman/forecast - Forecasting Functions for Time Series and Linear Models
- easystats/easystats - 🌌 The R easystats-project
- ddsjoberg/gtsummary - Presentation-Ready Data Summary and Analytic Result Tables
- thomasp85/ggraph - Grammar of Graph Graphics
- easystats/performance - 💪 Models' quality and performance metrics (R2, ICC, LOO, AIC, BF, ...)
- rstudio/renv - renv: Project environments for R.
- stan-dev/rstan - RStan, the R interface to Stan
- matloff/fasteR - Fast Lane to Learning R!
- tidyverse/readr - Read flat files (csv, tsv, fwf) into R
- ropensci/targets - Function-oriented Make-like declarative workflows for R
- mlr-org/mlr3 - mlr3: Machine Learning in R - next generation
- r-lib/httr - httr: a friendly http package for R
- jokergoo/circlize - Circular visualization in R
- futureverse/future - 🚀 R package: future: Unified Parallel and Distributed Processing in R for Everyone
- EmilHvitfeldt/paletteer - 🎨🎨🎨 Collection of most color palettes in a single R package
- sparklyr/sparklyr - R interface for Apache Spark
- tidyverse/magrittr - Improve the readability of R code with the pipe
- MichelNivard/gptstudio - GPT RStudio addins that enable GPT assisted coding, writing & analysis
- TheAlgorithms/R - Collection of various algorithms implemented in R.
- cutterkom/generativeart - Create Generative Art with R
- ThinkR-open/golem - A Framework for Building Robust Shiny Apps
- easystats/see - 🎨 Visualisation toolbox for beautiful and publication-ready figures
- klmr/box - Write reusable, composable and modular R code
- rstudio/pagedown - Paginate the HTML Output of R Markdown with CSS for Print
- hadley/r-pkgs - Building R packages
- r-lib/testthat - An R 📦 to make testing 😀
- MilesMcBain/datapasta - On top of spaghetti, all covered in cheese....
- Mikata-Project/ggthemr - Themes for ggplot2.
- r-tmap/tmap - R package for thematic maps
- r-lib/usethis - Set up commonly used 📦 components
- YuLab-SMU/ggtree - 🎄Visualization and annotation of phylogenetic trees
- google/rappor - RAPPOR: Privacy-Preserving Reporting Algorithms
- dselivanov/text2vec - Fast vectorization, topic modeling, distances and GloVe word embeddings in R.
- mjskay/ggdist - Visualizations of distributions and uncertainty
- dreamRs/shinyWidgets - shinyWidgets : Extend widgets available in shiny
- workflowr/workflowr - Organize your project into a research website
- quanteda/quanteda - An R package for the Quantitative Analysis of Textual Data
- rdpeng/ProgrammingAssignment2 - Repository for Programming Assignment 2 for R Programming on Coursera
- rstudio/keras3 - R Interface to Keras
- ramnathv/slidify - Generate reproducible html5 slides from R markdown
- joshuaulrich/quantmod - Quantitative Financial Modelling Framework
- ipeaGIT/geobr - Easy access to official spatial data sets of Brazil in R and Python
- pbiecek/xai_resources - Interesting resources related to XAI (Explainable Artificial Intelligence)
- grabear/awesome-rshiny - An awesome R-shiny list!
- z3tt/TidyTuesday - My contributions to the #TidyTuesday challenge, a weekly data visualization challenge. All plots are 💯 created in R with ggplot2.
- ramnathv/htmlwidgets - HTML Widgets for R
- hms-dbmi/UpSetR - An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..
- ropensci-archive/rtweet - 🐦 R client for interacting with Twitter's [stream and REST] APIs
- jennybc/googlesheets - Google Spreadsheets R API
- hrbrmstr/waffle - 🍁 Make waffle (square pie) charts in R
- gadenbuie/tidyexplain - 🤹♀ Animations of tidyverse verbs using R, the tidyverse, and gganimate
- GuangchuangYu/hexSticker - ✨ Hexagon sticker in R
- dkahle/ggmap - A package for plotting maps in R with ggplot2
- jalapic/engsoccerdata - English and European soccer results 1871-2022
- tidyverse/lubridate - Make working with dates in R just that little bit easier
- erikaduan/r_tips - R usage tips for data cleaning, data visualisation, statistical modelling and machine learning
- r-lib/styler - Non-invasive pretty printing of R code
- tidymodels/infer - An R package for tidyverse-friendly statistical inference
- tidyverse/reprex - Render bits of R code for sharing, e.g., on GitHub or StackOverflow.
- daattali/shinyjs - 💡 Easily improve the user experience of your Shiny apps in seconds
- r-lib/pkgdown - Generate static html documentation for an R package
- mjskay/tidybayes - Bayesian analysis + tidy data + geoms (R package)
- tidyverse/glue - Glue strings to data in R. Small, fast, dependency free interpreted string literals.
- r-spatial/rgee - Google Earth Engine for R
- jbkunst/highcharter - R wrapper for highcharts
- rstudio/ggvis - Interactive grammar of graphics for R
- rstudio/learnr - Interactive Tutorials with R Markdown
- ben519/MLPB - Machine Learning Problem Bible | Problem Set Here >>
- tidyverse/tibble - A modern re-imagining of the data frame
- easystats/report - 📜 🎉 Automated reporting of objects in R
- dmpe/R - Exercises (incl. analyses) with R language (math+statistics)
- mdozmorov/scRNA-seq_notes - A list of scRNA-seq analysis tools
- sqjin/CellChat - R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
- benmarwick/rrtools - rrtools: Tools for Writing Reproducible Research in R
- hrbrmstr/ggalt - 🌎 Extra Coordinate Systems, Geoms, Statistical Transformations & Scales for 'ggplot2'
- daattali/timevis - 📅 Create interactive timeline visualizations in R
- tidyverse/dtplyr - Data table backend for dplyr
- r-lib/cli - Tools for making beautiful & useful command line interfaces
- rstudio/RStartHere - A guide to some of the most useful R Packages that we know about
- christophergandrud/networkD3 - D3 JavaScript Network Graphs from R
- walkerke/tidycensus - Load US Census boundary and attribute data as 'tidyverse' and 'sf'-ready data frames in R
- rmcelreath/stat_rethinking_2020 - Statistical Rethinking Course Winter 2020/2021
- amplab-extras/SparkR-pkg - R frontend for Spark
- davidgohel/officer - 👮 officer: office documents from R
- tidyverse/stringr - A fresh approach to string manipulation in R
- leedrake5/Russia-Ukraine - Equipment Loss Tracking
- r-lidar/lidR - Airborne LiDAR data manipulation and visualisation for forestry application
- KentonWhite/ProjectTemplate - A template utility for R projects that provides a skeletal project.
- fstpackage/fst - Lightning Fast Serialization of Data Frames for R
- strengejacke/sjPlot - sjPlot - Data Visualization for Statistics in Social Science
- gesistsa/rio - 🐟 A Swiss-Army Knife for Data I/O
- r-lib/roxygen2 - Generate R package documentation from inline R comments
- REditorSupport/languageserver - An implementation of the Language Server Protocol for R
- nstrayer/datadrivencv - R package for building customizable CVs from spreadsheets
- toddwschneider/ballr - Interactive NBA and NCAA Shot Charts with R and Shiny
- joey711/phyloseq - phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
- ggobi/ggally - R package that extends ggplot2
- DiskFrame/disk.frame - Fast Disk-Based Parallelized Data Manipulation Framework for Larger-than-RAM Data
- elbersb/tidylog - Tidylog provides feedback about dplyr and tidyr operations. It provides wrapper functions for the most common functions, such as filter, mutate, select, and group_by, and provides detailed output for joins.
- tidymodels/corrr - Explore correlations in R
- tidymodels/recipes - Pipeable steps for feature engineering and data preprocessing to prepare for modeling
- igraph/rigraph - igraph R package
- davidgohel/flextable - table farming
- easystats/bayestestR - 👻 Utilities for analyzing Bayesian models and posterior distributions
- r-spatial/stars - Spatiotemporal Arrays, Raster and Vector Data Cubes
- pzhaonet/mindr - an R package which converts markdown files (.md, .Rmd) into mindmaps (brainstorms)
- immunogenomics/harmony - Fast, sensitive and accurate integration of single-cell data with Harmony
- massimoaria/bibliometrix - An R-tool for comprehensive science mapping analysis. A package for quantitative research in scientometrics and bibliometrics.
- ropensci/tabulapdf - Bindings for Tabula PDF Table Extractor Library
- tidyverse/forcats - 🐈🐈🐈🐈: tools for working with categorical variables (factors)
- thomasp85/tidygraph - A tidy API for graph manipulation
- rstudio/blastula - Easily send great-looking HTML email messages from R
- wilkox/gggenes - ➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2
- tidyverts/tsibble - Tidy Temporal Data Frames and Tools
- dcomtois/summarytools - R Package to Quickly and Neatly Summarize Data
- maksimhorowitz/nflscrapR - R Package for Scraping and Aggregating NFL Data
- sinhrks/ggfortify - Define fortify and autoplot functions to allow ggplot2 to handle some popular R packages.
- r-lib/rlang - Low-level API for programming with R
- boxuancui/DataExplorer - Automate Data Exploration and Treatment
- rstudio/r2d3 - R Interface to D3 Visualizations
- r-dbi/bigrquery - An interface to Google's BigQuery from R.
- noamross/redoc - [NOTE: Project in suspended animation for now] Reversible Reproducible Documents
- marcusvolz/mathart - Create mathematical art with R
- bedatadriven/renjin - JVM-based interpreter for the R language for the statistical analysis.
- JaseZiv/worldfootballR - A wrapper for extracting world football (soccer) data from FBref, Transfermark, Understat
- cynkra/dm - Working with relational data models in R
- corybrunson/ggalluvial - ggplot2 extension for alluvial plots
- pola-rs/r-polars - Polars R bindings
- Appsilon/shiny.semantic - Shiny support for powerful Fomantic UI library.
- mca91/EconometricsWithR - 📖An interactive companion to the well-received textbook 'Introduction to Econometrics' by Stock & Watson (2015)
- hadley/plyr - A R package for splitting, applying and combining large problems into simpler problems
- giuseppec/iml - iml: interpretable machine learning R package
- e-sensing/sits - Satellite image time series in R
- gadenbuie/regexplain - 🔍 An RStudio addin slash regex utility belt
- thomasp85/lime - Local Interpretable Model-Agnostic Explanations (R port of original Python package)
- MRCIEU/TwoSampleMR - R package for performing 2-sample MR using MR-Base database
- tidyverse/dbplyr - Database (DBI) backend for dplyr
- vegandevs/vegan - R package for community ecologists: popular ordination methods, ecological null models & diversity analysis
- rstudio/hex-stickers - RStudio hex stickers
- tonyfischetti/assertr - Assertive programming for R analysis pipelines
- r-lib/progress - Progress bar in your R terminal
- ropensci-review-tools/goodpractice - Advice on R Package Building
- ropensci/magick - Magic, madness, heaven, sin
- chris-mcginnis-ucsf/DoubletFinder - R package for detecting doublets in single-cell RNA sequencing data
- PoisonAlien/maftools - Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.
- RinteRface/shinydashboardPlus - extensions for shinydashboard
- easystats/parameters - 📊 Computation and processing of models' parameters
- yrosseel/lavaan - an R package for structural equation modeling and more
- kassambara/rstatix - Pipe-friendly Framework for Basic Statistical Tests in R
- rudeboybert/fivethirtyeight - R package of data and code behind the stories and interactives at FiveThirtyEight
- ropensci/visdat - Preliminary Exploratory Visualisation of Data
- ThinkR-open/remedy - RStudio Addins to Simplify Markdown Writing
- RinteRface/bs4Dash - Bootstrap 4 shinydashboard using AdminLTE3
- thomasp85/scico - Palettes for R based on the Scientific Colour-Maps
- r-causal/ggdag -
↙️ ↘️ An R package for working with causal directed acyclic graphs (DAGs) - nflverse/nflfastR - A Set of Functions to Efficiently Scrape NFL Play by Play Data
- RConsortium/S7 - S7: a new OO system for R
- easystats/correlation - 🔗 Methods for Correlation Analysis
- tidyverse/ellmer - Call LLM APIs from R
- PaulC91/shinyauthr - R package with shiny authentication modules
- trinker/sentimentr - Dictionary based sentiment analysis that considers valence shifters
- stan-dev/bayesplot - bayesplot R package for plotting Bayesian models
- ewenme/ghibli - Studio Ghibli colour palettes
- twbattaglia/RNAseq-workflow - A repository for setting up a RNAseq workflow
- rstats-wtf/what-they-forgot - "What They Forgot to Teach You About R" website / eBook
- ropensci/stplanr - Sustainable transport planning with R
- LKremer/ggpointdensity - 📈 📊 Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.
- ryantimpe/brickr - 3D LEGO models and mosaics from images using R and #tidyverse
- r-lib/scales - Tools for ggplot2 scales
- RamiKrispin/TSstudio - Tools for time series analysis and forecasting
- r-lib/R6 - Encapsulated object-oriented programming for R
- data-cleaning/validate - Professional data validation for the R environment
- wleepang/DesktopDeployR - A framework for deploying self-contained R-based applications to the desktop
- hadley/emo - Easily insert emoji into R and RMarkdown
- GreenleafLab/ArchR - ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
- r-lib/here - A simpler way to find your files
- anthonynorth/rscodeio - An RStudio theme inspired by Visual Studio Code.
- jennybc/row-oriented-workflows - Row-oriented workflows in R with the tidyverse
- easystats/insight - 🔮 Easy access to model information for various model objects
- RinteRface/shinyMobile - shiny API for Framework7 (IOS/android)
- welch-lab/liger - R package for integrating and analyzing multiple single-cell datasets
- swsoyee/2019-ncov-japan - 🦠 Interactive dashboard for real-time recording of COVID-19 outbreak in Japan
- rstudio/tufte - Tufte Styles for R Markdown Documents
- rstudio/packrat - Packrat is a dependency management system for R
- bstewart/stm - An R Package for the Structural Topic Model
- therneau/survival - Survival package for R
- kabacoff/RiA2 - Source code for R in Action, Second Edition
- tidyverse/modelr - Helper functions for modelling
- susanli2016/Data-Analysis-with-R - Using gglot2, tidyr, dplyr, ggmap, choroplethr, shiny, logistic regression, clustering models and more
- jinworks/CellChat - R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
- riatelab/cartography - Thematic Cartography for R
- MathiasHarrer/Doing-Meta-Analysis-in-R - [Read-Only] All R code and source files for the online guide "Doing Meta-Analysis with R: A Hands-On Guide"
- yusuzech/r-web-scraping-cheat-sheet - Guide, reference and cheatsheet on web scraping using rvest, httr and Rselenium.
- stan-dev/rstanarm - rstanarm R package for Bayesian applied regression modeling
- mkearney/tweetbotornot - 🤖 R package for detecting Twitter bots via machine learning
- talgalili/heatmaply - Interactive Heat Maps for R Using plotly
- DillonHammill/DataEditR - An Interactive R Package for Viewing, Entering Filtering and Editing Data
- daattali/ggExtra - 📊 Add marginal histograms to ggplot2, and more ggplot2 enhancements
- BillPetti/baseballr - A package written for R focused on baseball analysis. Currently in development.
- cloudyr/aws.s3 - Amazon Simple Storage Service (S3) API Client
- dupadhyaya/Ranalytics18 - My work on Analytics and Research in Data Science
- SurajGupta/r-source - R Source Code
- dgrtwo/data-screencasts - Code from live exploratory analyses of data in R
- charlie86/spotifyr - R wrapper for Spotify's Web API
- MarioniLab/miloR - R package implementation of Milo for testing for differential abundance in KNN graphs
- luukvdmeer/sfnetworks - Tidy Geospatial Networks in R
- krzjoa/awesome-r-dataviz - Curated resources about Data Visualization, Drawing & Publishing in R
- lcpmgh/colors - 学术期刊配色推荐器
- tidyverse/googlesheets4 - Google Spreadsheets R API (reboot of the googlesheets package)
- stuart-lab/signac - R toolkit for the analysis of single-cell chromatin data
- const-ae/ggupset - Combination matrix axis for 'ggplot2' to create 'UpSet' plots
- awalker89/openxlsx - R package for .xlsx file reading and writing.
- JoaquinAmatRodrigo/Estadistica-con-R - Apuntes personales sobre estadística, machine learning y lenguaje de programación R
- r-hub/rhub - R-hub API client
- mages/googleVis - Interface between R and the Google Chart Tools
- PMassicotte/gtrendsR - R functions to perform and display Google Trends queries
- salimk/Rcrawler - An R web crawler and scraper
- vincentarelbundock/countrycode - R package: Convert country names and country codes. Assigns region descriptors.
- pablobarbera/Rfacebook - Dev version of Rfacebook package: Access to Facebook API via R
- tashapiro/tanya-data-viz - Personal data visualization side projects.
- nathaneastwood/poorman - A poor man's dependency free grammar of data manipulation
- ropensci/RSelenium - An R client for Selenium Remote WebDriver
- EasyD/IntroToDataScience - GitHub Repository to accompany my YouTube series of videos on Introductory Data Science using R.
- cols4all/cols4all-R - Colors for all (R package)
- swarm-lab/editR - A Rmarkdown editor with instant preview
- xia-lab/MetaboAnalystR - R package for MetaboAnalyst
- r-lib/remotes - Install R packages from GitHub, GitLab, Bitbucket, git, svn repositories, URLs
- stemangiola/tidyHeatmap - Draw heatmap simply using a tidy data frame
- richfitz/remake - Make-like declarative workflows in R
- tidymodels/rsample - Classes and functions to create and summarize resampling objects
- joshuaulrich/TTR - Technical analysis and other functions to construct technical trading rules with R
- EmilHvitfeldt/ggpage - Creates Page Layout Visualizations in R 📄📄📄
- benmarwick/wordcountaddin - Word counts and readability statistics in R markdown documents
- r-lib/covr - Test coverage reports for R
- hafen/geofacet - R package for geographical faceting with ggplot2
- r-dbi/RPostgres - A DBI-compliant interface to PostgreSQL
- walkerke/tigris - Download and use Census TIGER/Line shapefiles in R
- ropensci/rnoaa - R interface to many NOAA data APIs
- paws-r/paws - Paws, a package for Amazon Web Services in R
- grantmcdermott/tinyplot - Lightweight extension of the base R graphics system
- bnosac/taskscheduleR - Schedule R scripts/processes with the Windows task scheduler.
- r-lib/rex - Friendly regular expressions for R.
- junjunlab/scRNAtoolVis - Useful functions to make your scRNA-seq plot more cool!
- jlmelville/uwot - An R package implementing the UMAP dimensionality reduction method.
- r-dbi/RSQLite - R interface for SQLite
- Azure/Microsoft365R - R SDK for interacting with Microsoft 365 APIs
- ModelOriented/modelStudio - 📍 Interactive Studio for Explanatory Model Analysis
- BorchLab/scRepertoire - A toolkit for single-cell immune profiling
- tidyverse/googledrive - Google Drive R API
- microsoft/TagAnomaly - Anomaly detection analysis and labeling tool, specifically for multiple time series (one time series per category)
- markvanderloo/stringdist - String distance functions for R
- jcrodriguez1989/chatgpt - Interface to ChatGPT from R
- dmi3kno/polite - Be nice on the web
- jumpingrivers/datasauRus - R Package 📦 Containing the Datasaurus Dozen datasets 📊
- taiyun/corrplot - A visual exploratory tool on correlation matrix
- jrnold/r4ds-exercise-solutions - Exercise solutions to "R for Data Science"
- clauswilke/colorblindr - An R package to simulate colorblindness on R figures.
- rstudio/pins-r - Pin, discover, and share resources
- r-lib/crayon - 🖍️ R package for colored terminal output — now superseded by cli
- wch/extrafont - Tools for using fonts in R graphics
- tidyverse/duckplyr - A drop-in replacement for dplyr, powered by DuckDB for speed.
- scRNA-tools/scRNA-tools - Table of software for the analysis of single-cell RNA-seq data.
- ropensci/osmdata - R package for downloading OpenStreetMap data
- datacarpentry/R-ecology-lesson - Data Analysis and Visualization in R for Ecologists
- r-lib/memoise - Easy memoisation for R
- openair-project/openair - 🧭 Open source tools for air quality data analysis
- JohnCoene/coronavirus - 🦠 Novel Coronavirus (COVID-19) Tracker
- immunomind/immunarch - 🧬 immunarch [R package] – Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires
- georgevbsantiago/qsacnpj - Pacote que trata e organiza os dados do Cadastro Nacional da Pessoa Jurídica (CNPJ)
- ropensci-archive/rplos -
⚠️ ARCHIVED⚠️ R client for the PLoS Journals API - abresler/nbastatR - NBA Stats API Wrapper and more for R
- eddelbuettel/littler - A scripting and command-line front-end for GNU R
- ropensci/software-review - rOpenSci Software Peer Review.
- BioinformaticsFMRP/TCGAbiolinks - TCGAbiolinks
- mitchelloharawild/icons - R package to easily insert web icons to RMarkdown
- FrankPortman/bayesAB - 🐢 bayesAB: Fast Bayesian Methods for A/B Testing
- bokeh/rbokeh - R interface to Bokeh http://hafen.github.io/rbokeh/
- Appsilon/rhino - Build high quality, enterprise-grade Shiny apps at speed
- bernatgel/karyoploteR - karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
- 16EAGLE/getSpatialData - An R package 📦 making it easy to query, preview, download and preprocess multiple kinds of spatial data 🛰 via R. All beta.
- wilkox/ggfittext - 🔠 ggplot2 geoms to fit text into boxes
- r-lib/lobstr - Understanding complex R objects with tools similar to str()
- mrkaye97/slackr - An R package for sending messages from R to Slack
- bkelly-lab/ReplicationCrisis - Code for "Is There a Replication Crisis in Finance" by Jensen, Kelly and Pedersen (2023)
- NickCH-K/causalgraphs - R code for causal graph animations
- virtualstaticvoid/heroku-buildpack-r - Heroku buildpack for R - Makes deploying R on Heroku easy
- ropensci/charlatan - Create fake data in R
- max-alletsee/rstudio-themes - A collection of themes for RStudio
- rstudio-education/shiny.rstudio.com-tutorial - Slides and exercises for the video tutorial at https://shiny.rstudio.com/tutorial/
- tidymodels/stacks - An R package for tidy stacked ensemble modeling
- wch/rgcookbook - R Graphics Cookbook
- r-lib/callr - Call R from R
- sjmgarnier/viridis - Colorblind-Friendly Color Maps for R
- microbiome/microbiome - microbiome R package
- rstudio/fontawesome - Easily insert FontAwesome icons into R Markdown docs and Shiny apps
- Rapporter/pander - An R Pandoc Writer: Convert arbitrary R objects into markdown
- neuhausi/canvasXpress - CanvasXpress: A JavaScript Library for Data Analytics with Full Audit Trail Capabilities.
- xiaolei-lab/rMVP - 📮 A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool For Genome-Wide Association Study
- jennybc/gapminder - Excerpt from the Gapminder data, as an R data package and in plain text delimited form
- kolaczyk/sand - Statistical Analysis of Network Data with R, 2nd Edition
- r-lib/waldo - Find differences between R objects
- moldach/vapoRwave - 📼👾🕹Vaporwave themes and color palettes for ggplot2💾👨🎤📺
- futureverse/progressr - 三 R package: An Inclusive, Unifying API for Progress Updates
- thomas-neitmann/ggcharts - Get You to Your Desired Plot Faster
- Tazinho/Advanced-R-Solutions - Set of solutions for the Advanced R programming book
- jessecambon/tidygeocoder - Geocoding Made Easy
- DOI-USGS/dataRetrieval - This R package is designed to obtain USGS or EPA water quality sample data, streamflow data, and metadata directly from web services.
- ajtulloch/Elements-of-Statistical-Learning - Contains LaTeX, SciPy and R code providing solutions to exercises in Elements of Statistical Learning (Hastie, Tibshirani & Friedman)
- smartinsightsfromdata/rpivotTable - A R wrapper for the great library pivottable
- o2r-project/containerit - Package an R workspace and all dependencies as a Docker container
- mkearney/rstudiothemes - A curated list of RStudio themes found on Github
- bergant/datamodelr - Data model diagrams in R
- Yunuuuu/ggalign - A 'ggplot2' Extension for Consistent Axis Alignment
- hughjonesd/ggmagnify - Create a magnified inset of part of a ggplot object
- yihui/servr - A simple HTTP server in R
- rexyai/RestRserve - R web API framework for building high-performance microservices and app backends
- eddelbuettel/r2u - CRAN as Ubuntu Binaries
- bmschmidt/wordVectors - An R package for creating and exploring word2vec and other word embedding models
- VerbalExpressions/RVerbalExpressions - 💬 Create regular expressions easily
- schochastics/graphlayouts - new layout algorithms for network visualizations in R
- kosukeimai/fastLink - R package fastLink: Fast Probabilistic Record Linkage
- Appsilon/shiny.fluent - Microsoft's Fluent UI for Shiny apps
- bleutner/RStoolbox - Remote Sensing Data Analysis in R 🛰
- mllg/checkmate - Fast and versatile argument checks
- statsbomb/StatsBombR - This repository is an R package to easily stream StatsBomb data from the API using your log in credentials or from the Open Data GitHub repository cost free into R .
- ropensci/taxize - A taxonomic toolbelt for R
- Yang-Tang/shinyjqui - jQuery UI Interactions and Effects for Shiny
- ecpolley/SuperLearner - Current version of the SuperLearner R package
- constantAmateur/SoupX - R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data
- cjbarrie/academictwitteR - Repo for academictwitteR package to query the Twitter Academic Research Product Track v2 API endpoint.
- talgalili/installr - Functions for installing softwares from within R
- r-spatial/leafgl - R package for fast web gl rendering for leaflet
- ropensci-archive/fulltext -
⚠️ ARCHIVED⚠️ Search across and get full text for OA & closed journals - fastverse/fastverse - An Extensible Suite of High-Performance and Low-Dependency Packages for Statistical Computing and Data Manipulation in R
- vincentarelbundock/tinytable - Simple and Customizable Tables in
R
- dirkschumacher/ompr - R package to model Mixed Integer Linear Programs
- ropensci/iheatmapr - Complex, interactive heatmaps in R
- r-rust/hellorust - Template R package with rust bindings
- leeper/margins - An R Port of Stata's 'margins' Command
- jakelawlor/PNWColors - A Pacific Northwest inspired R color palette package
- RamiKrispin/vscode-r - A Tutorial for Setting R Development Environment with VScode, Dev Containers, and Docker
- hafen/trelliscopejs - TrelliscopeJS R Package
- chasemc/electricShine - Create Standalone Installable Shiny Apps
- tmobile/r-tensorflow-api - A small Docker container for using R and TensorFlow as an enterprise API
- rstudio/config - config package for R
- asardaes/dtwclust - R Package for Time Series Clustering Along with Optimizations for DTW
- tidymodels/tidypredict - Run predictions inside the database
- robjhyndman/tsfeatures - Time series features
- r-lib/zeallot - Variable assignment with zeal! (or multiple, unpacking, and destructuring assignment in R)
- Appsilon/shiny.router - A minimalistic router for your Shiny apps.
- R-CoderDotCom/calendR - Ready to print calendars with ggplot2
- lorenzwalthert/precommit - pre-commit hooks for R projects
- knausb/vcfR - Tools to work with variant call format files
- yihui/formatR - Format R Code Automatically
- khanhnamle1994/statistical-learning - Lecture Slides and R Sessions for Trevor Hastie and Rob Tibshinari's "Statistical Learning" Stanford course
- karthik/holepunch - Make your R project Binder ready
- Appsilon/semantic.dashboard - Quick, beautiful and customizable dashboard template for Shiny based on shiny.semantic and Fomantic UI.
- trinker/wakefield - Generate random data sets
- AppliedDataSciencePartners/xgboostExplainer - An R package that makes xgboost models fully interpretable
- sowla/useR2019-materials - Links to materials from tutorials and talks from useR 2019
- pzhaonet/bookdownplus - The easiest way to use R package bookdown for writing varied types of books and documents
- dokato/todor - TODOr - RStudio add-in for finding TODO, FIXME, CHANGED etc. comments in your code.
- bergant/finstr - 📈 Financial statements in R
- eddelbuettel/gsir-te - Getting Started in R -- Tinyverse Edition
- alastairrushworth/inspectdf - 🛠️ 📊 Tools for Exploring and Comparing Data Frames
- vnijs/radiant - Business analytics using R and Shiny
- samuel-marsh/scCustomize - R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
- rstudio/pool - Object Pooling in R
- OpenDroneMap/FIELDimageR - FIELDimageR: A R package to analyze orthomosaic images from agricultural field trials. This package is a compilation of functions to analyze pos-mosaicking images from research fields, and allows to: crop the image; remove soil effect; build vegetation indices; rotate the image; build the plot shapefile; extract information for each plot; and evaluate stand count, canopy percentage, and plant height.
- karthik/rdrop2 - Dropbox Interface from R
- jsta/r-docker-tutorial - A docker tutorial for reproducible research
- wviechtb/metafor - A meta-analysis package for R
- r-lib/bench - High Precision Timing of R Expressions
- quanteda/spacyr - R wrapper to spaCy NLP
- HealthCatalyst/healthcareai-r - R tools for healthcare machine learning
- covid19datahub/COVID19 - A worldwide epidemiological database for COVID-19 at fine-grained spatial resolution
- romantseg/rbooks - A curated list of #rstats books
- r-lib/conflicted - An alternative conflict resolution strategy for R
- jonocarroll/mathpix - Query the mathpix API to convert math images to LaTeX
- geoffjentry/twitteR - R based twitter client
- trinker/textclean - Tools for cleaning and normalizing text data
- ggrothendieck/sqldf - Perform SQL Selects on R Data Frames
- cwickham/purrr-tutorial - A introduction to purrr
- ropensci/rix - Reproducible Data Science environments for R with Nix
- jennybc/ggplot2-tutorial - Teaching materials for the R package ggplot2
- saezlab/decoupleR - R package to infer biological activities from omics data using a collection of methods.
- ropensci/tesseract - Bindings to Tesseract OCR engine for R
- r-lib/httr2 - Make HTTP requests and process their responses. A modern reimagining of httr.
- rich-iannone/stationaRy - Get hourly meteorological data from one of thousands of global stations
- rfsaldanha/microdatasus - Download de dados do DataSUS e pré-processamento no R.
- ropensci/elastic - R client for the Elasticsearch HTTP API
- ropensci/rnaturalearth - An R package to hold and facilitate interaction with natural earth map data 🌍
- exaexa/scattermore - very fast scatterplots for R
- easystats/modelbased - 📈 Estimate effects, contrasts and means based on statistical models
- TullyMonster/MendelRookie - 新手友好的孟德尔随机化项目
- jackwasey/icd - New maintainer/owner needed Fast ICD-10 and ICD-9 comorbidities, decoding and validation in R. NB use main instead of master for default branch.
- toddwschneider/shiny-salesman - Traveling salesman with simulated annealing, R, and Shiny
- r-spatialecology/landscapemetrics - Landscape Metrics for Categorical Map Patterns 🗺️ in R
- pharmaverse/admiral - ADaM in R Asset Library
- erocoar/gghalves - ✂️ Easy half-half geoms in ggplot2
- daattali/shinyalert - 🗯️ Easily create pretty popup messages (modals) in Shiny
- cdeterman/gpuR - R interface to use GPU's
- AdrianAntico/AutoQuant - R package for automation of machine learning, forecasting, model evaluation, and model interpretation
- rOpenGov/eurostat - R tools for Eurostat data
- davidgohel/ReporteRs - Note that ReporteRs has been removed from CRAN the 16th of July 2018 and is not maintained anymore. please migrate to officer.
- ankane/jetpack - A friendly package manager for R
- teunbrand/legendry - A 'ggplot2' extension that focusses on expanding the plotter's arsenal of guides, such as axes, legends and colour bars. It brings various improvements to existing guides by re-implementation, as well as adding novel guides.
- riatelab/osrm - Interface between R and the OpenStreetMap-based routing service OSRM
- IOBR/IOBR - IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.
- OpenIntroStat/openintro - 📦 R package for data and supplemental functions for OpenIntro resources
- ben519/DataWrangling - The ultimate reference guide to data wrangling with Python and R
- nicolewhite/RNeo4j - Neo4j Driver for R.
- insightsengineering/rtables - Reporting tables with R
- talgalili/d3heatmap - A D3.js-based heatmap htmlwidget for R
- rstudio/Intro - Course materials for "Introduction to Data Science with R", a video course by RStudio and O'Reilly Media
- rlbarter/superheat - An r package for generating beautiful and customizable heatmaps
- RGLab/MAST - Tools and methods for analysis of single cell assay data in R
- r-lib/processx - Execute and Control Subprocesses from R
- echen/ggplot2-tutorial - Quick introduction to ggplot2 (no knowledge of R assumed)
- r-lib/asciicast - Turn R scripts into terminal screencasts
- hadley/strict - Make R a little bit stricter
- Chicago/RSocrata - Provides easier interaction with Socrata open data portals http://dev.socrata.com. Users can provide a 'Socrata' data set resource URL, or a 'Socrata' Open Data API (SoDA) web query, or a 'Socrata' "human-friendly" URL, returns an R data frame. Converts dates to 'POSIX' format. Manages throttling by 'Socrata'.
- rolkra/explore - R package that makes basic data exploration radically simple (interactive data exploration, reproducible data science)
- dataspelunking/MLwR - Machine Learning with R
- r-lib/mirai - Minimalist Async Evaluation Framework for R
- ModelOriented/randomForestExplainer - A set of tools to understand what is happening inside a Random Forest
- laresbernardo/lares - Analytics & Machine Learning R Sidekick
- trevorstephens/titanic - Getting Started With R
- Pakillo/grateful - Facilitate citation of R packages
- ycphs/openxlsx - openxlsx - a fast way to read and write complex xslx files
- jennybc/code-smells-and-feels - Talk on code smells and feels and how to change that via refactoring
- brodieG/diffobj - Compare R Objects with a Diff
- r-lib/gmailr - Access the Gmail RESTful API from R.
- riatelab/mapsf - Thematic cartography with R
- Raymo111/Raymo111 - My awesome profile README
- gaborcsardi/prompt - Dynamic R prompt
- ChiLiubio/microeco - An R package for data analysis in microbial community ecology
- bbolker/broom.mixed - tidy methods for mixed models in R
- trinker/topicmodels_learning - A repository of learning & R resources related to topic models
- noriakis/ggkegg - Analyzing and visualizing KEGG information using the grammar of graphics
- jamesotto852/ggdensity - An R package for interpretable visualizations of bivariate density estimates
- al2na/methylKit - R package for DNA methylation analysis
- markvanderloo/tinytest - A lightweight, no-dependency, but full-featured package for unit testing in R
- dgrapov/TeachingDemos - Bioinformatics related demos and tutorials using the R programming language
- iSEE/iSEE - R/shiny interface for interactive visualization of data in SummarizedExperiment objects
- Tatvic/RGoogleAnalytics - R Library to easily extract data from the Google Analytics API into R
- rticulate/import - An Import Mechanism For R
- Pakillo/R-GIS-tutorial - Spatial data in R: using R as a GIS
- GenomicSEM/GenomicSEM - R-package for structural equation modeling based on GWAS summary data
- adamribaudo/storytelling-with-data-ggplot - Recreation of Cole Nussbaumer Knaflic's Storytelling with Data plots using R an ggplot2
- mayoverse/arsenal - An Arsenal of 'R' Functions for Large-Scale Statistical Summaries
- kosukeimai/MatchIt - R package MatchIt
- tidyverse/design - Tidyverse design principles
- r-simmer/simmer - Discrete-Event Simulation for R
- r-lib/gh - Minimalistic GitHub API client in R
- kaz-yos/tableone - R package to create "Table 1", description of baseline characteristics with or without propensity score weighting
- katiejolly/nationalparkcolors - R package for color themes inspired by national parks
- satijalab/sctransform - R package for modeling single cell UMI expression data using regularized negative binomial regression
- ropensci/qualtRics - Download ⬇️ Qualtrics survey data directly into R!
- cbail/textnets - R package to perform automated text analysis using network techniques
- ropensci/biomartr - Genomic Data Retrieval with R
- r-lib/xml2 - Bindings to libxml2
- joshuaulrich/xts - Extensible time series class that provides uniform handling of many R time series classes by extending zoo.
- trafficonese/leaflet.extras - Extra functionality for leaflet R package.
- microsoft/microsoft-r-open - Microsoft R Open Source
- PecanProject/pecan - The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.
- lionel-/codegrip - Reshaping and navigation commands for R code
- jimhester/lookup - Lookup R full function definitions, including compiled code, S3 and S4 methods.
- zatonovo/lambda.r - Functional programming in R
- vincentarelbundock/WDI - R package to download World Bank data
- ropensci/git2r - R bindings to the libgit2 library
- gavinsimpson/gratia - ggplot-based graphics and useful functions for GAMs fitted using the mgcv package
- r-spatial/mapedit - Interactive editing of spatial data in R
- griffithlab/GenVisR - Genome data visualizations
- gadenbuie/epoxy - Extra-strength glue engines for R Markdown, Quarto, and Shiny
- youngwoos/Doit_R - <Do it! 쉽게 배우는 R 데이터 분석> 저장소
- philchalmers/mirt - Multidimensional item response theory
- futureverse/future.apply - 🚀 R package: future.apply - Apply Function to Elements in Parallel using Futures
- emitanaka/edibble - An R-package that encapsulate elements of experimental design for better planning, management, and workflow
- ACCLAB/dabestr - Data Analysis with Bootstrap Estimation in R
- taylor-arnold/cleanNLP - R package providing annotators and a normalized data model for natural language processing
- nrennie/tidytuesday - This repository contains the R and Python code used to produce my visualisations for the #TidyTuesday challenges.
- mhahsler/recommenderlab - recommenderlab - Lab for Developing and Testing Recommender Algorithms - R package
- gergness/srvyr - R package to add 'dplyr'-like Syntax for Summary Statistics of Survey Data
- ambiorix-web/ambiorix - 🖥️ Web framework for R
- wilkox/treemapify - 🌳 Draw treemaps in ggplot2
- edwindj/whisker - {{mustache}} for R
- docopt/docopt.R - Command-line interface description language for R (http://docopt.org)
- MatsuuraKentaro/RStanBook - 『StanとRでベイズ統計モデリング』のサポートページです.
- datacamp/RDocumentation - R package to integrate rdocumentation.org into your R workflow
- omarwagih/ggseqlogo - Publication-quality sequence logos in R
- gluc/data.tree - General Purpose Hierarchical Data Structure for R
- extendr/rextendr - An R package that helps scaffolding extendr-enabled packages or compiling Rust code dynamically
- yonicd/carbonate - carbon.js for R
- thebioengineer/camcorder - Record plots generated during an R session and replay as a gif!
- stephenslab/susieR - R package for "sum of single effects" regression.
- r-spatial/qgisprocess - R package to use QGIS processing algorithms
- r-for-educators/flair - decorate your R code
- lbenz730/ncaahoopR - An R package for working with NCAA Basketball Play-by-Play Data
- kharchenkolab/conos - R package for the joint analysis of multiple single-cell RNA-seq datasets
- hadley/reshape - An R package to flexible rearrange, reshape and aggregate data
- kcuilla/reactablefmtr - Streamlined Table Styling and Formatting for Reactable
- insightsengineering/teal - Exploratory Web Apps for Analyzing Clinical Trial Data
- SSSYDYSSS/TransProR - Analysis and visualization of multi-omics data. In ongoing development: multi-modal fusion, sparse learning, and spatio-temporal effects...
- hadley/assertthat - User friendly assertions for R
- yihui/animation - A gallery of animations in statistics and utilities to create animations
- will-r-chase/aRt - Generative or data-driven artwork made with R
- maxtoki/baseball_R - Companion to Analyzing Baseball Data with R
- JustinMShea/wooldridge - The official R data package for "Introductory Econometrics: A Modern Approach". A vignette contains example models from each chapter.
- HenrikBengtsson/matrixStats - R package: Methods that Apply to Rows and Columns of Matrices (and to Vectors)
- GoekeLab/bambu - Reference-guided transcript discovery and quantification for long read RNA-Seq data
- cvxgrp/CVXR - An R modeling language for convex optimization problems.
- yihui/litedown - A lightweight version of R Markdown (without using Pandoc or knitr)
- skranz/RTutor - Creating interactive R Problem Sets. Automatic hints and solution checks. (Shiny or RStudio)
- pbs-assess/sdmTMB - 🌎 An R package for spatial and spatiotemporal GLMMs with TMB
- KlausVigo/phangorn - Phylogenetic analysis in R
- jhollist/elevatr - An R package for accessing elevation data
- flujoo/gm - R Package for Music Creation
- privefl/bigsnpr - R package for the analysis of massive SNP arrays.
- johannesbjork/LaCroixColoR - LaCroix Color Palettes for R.
- gkaramanis/aRtist - Making art with R
- renkun-ken/rlist - A Toolbox for Non-Tabular Data Manipulation
- Laurae2/Laurae - Advanced High Performance Data Science Toolbox for R by Laurae
- ateucher/rmapshaper - An R wrapper for the mapshaper javascript library
- rstudio/promises - A promise library for R
- hadley/pryr - Pry open the covers of R
- mkearney/resist_oped - 🕵🏽♀️ Identifying the author behind New York Time’s op-ed from inside the Trump White House.
- jthomasmock/gtExtras - A Collection of Helper Functions for the gt Package.
- jeroen/V8 - Embedded JavaScript Engine for R
- dirkschumacher/llr - Lisp-like-R: A clojure inspired lisp that compiles to R in R
- spatstat/spatstat - Umbrella package of the 'spatstat' family................
- sctyner/memer - A tidyverse compatible package for creating memes in R using the magick package.
- ropensci/textreuse - Detect text reuse and document similarity
- pewresearch/pewmethods - Pew Research Center Methods team R package of miscellaneous functions
- jennybc/send-email-with-r - How to send a bunch of email from R
- GuangchuangYu/badger - Badge for R Package
- BlakeRMills/MoMAColors - Color Schemes based around artwork and the Museum of Modern Art.
- ropensci/rentrez - talk with NCBI entrez using R
- stan-dev/shinystan - shinystan R package and ShinyStan GUI
- sneumann/xcms - This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
- ropensci-archive/opendata - ⛔ ARCHIVED ⛔
- nsgrantham/ggdark - Dark mode for ggplot2 themes
- Lchiffon/leafletCN - An R gallery for China and other geojson choropleth map in leaflet
- DUanalytics/rAnalytics - Analytics in R
- microsoft/finnts - Microsoft Finance Time Series Forecasting Framework (FinnTS) is a forecasting package that utilizes cutting-edge time series forecasting and parallelization on the cloud to produce accurate forecasts for financial data.
- m-clark/Miscellaneous-R-Code - Code that might be useful to others for learning/demonstration purposes, specifically along the lines of modeling and various algorithms. Superseded by the models-by-example repo.
- hgeorgako/rfortraders - Quantitative Trading with R
- OHDSI/PatientLevelPrediction - An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.
- mhahsler/arules - Mining Association Rules and Frequent Itemsets with R
- briatte/ggnet - Network visualization with ggplot2
- juba/explor - Interfaces for Multivariate Analysis in R
- dieghernan/tidyterra - tidyverse and ggplot2 methods for terra spatial objects
- tomwenseleers/export - R package for streamlined export of graphs and data tables.
- mixOmicsTeam/mixOmics - Development repository for the Bioconductor package 'mixOmics '
- merlinoa/shinyFeedback - display user feedback next to Shiny inputs
- enblacar/SCpubr - Generate high quality, publication ready visualizations for single cell transcriptomics data.
- colearendt/tidyjson - Tidy your JSON data in R with tidyjson
- strengejacke/sjstats - Effect size measures and significance tests
- stefano-meschiari/latex2exp - Use LaTeX in R graphics.
- mikejohnson51/climateR - An R 📦 for getting point and gridded climate data by AOI
- lmullen/gender - Predict Gender from Names Using Historical Data
- JohnCoene/cicerone - 🏛️ Give tours of your Shiny apps
- egeulgen/pathfindR - pathfindR: Enrichment Analysis Utilizing Active Subnetworks
- cynkra/fledge - Wings for your R packages: Streamline the process of versioning R packages and updating NEWS
- computationalstylistics/stylo - R package for stylometric analyses
- rstudio/vetiver-r - Version, share, deploy, and monitor models
- mplatzer/BTYDplus - R package for Customer Behavior Analysis
- jennybc/r-graph-catalog - All graphs in “Creating More Effective Graphs”, made with R package ggplot2.
- ankane/dbx - A fast, easy-to-use database library for R
- SingleR-inc/SingleR - Clone of the Bioconductor repository for the SingleR package.
- r-spatial/RQGIS - RQGIS - integrating R with QGIS
- rpremraj/mailR - A utility to send emails from the R programming environment
- ropensci/piggyback - 📦 for using large(r) data files on GitHub
- mlr-org/mlrMBO - Toolbox for Bayesian Optimization and Model-Based Optimization in R
- leeper/slopegraph - Edward Tufte-Inspired Slopegraphs
- decryptr/decryptr - An extensible API for breaking captchas
- YuLab-SMU/MicrobiotaProcess - 🦠 A comprehensive R package for deep mining microbiome
- nacnudus/unpivotr - Unpivot complex and irregular data layouts in R
- dupadhyaya/rAnalyticsHHE - Repository for Online Classes
- cwatson/brainGraph - Graph theory analysis of brain MRI data
- abresler/fundManageR - An Investment Management toolkit for R. Because Excel is a threat to the global financial system.
- Twitter-Sentiment-Analysis/R - Sentiment analysis and visualization of real-time tweets using R
- skardhamar/rga - R Google Analytics
- ropensci/tokenizers - Fast, Consistent Tokenization of Natural Language Text
- AliciaSchep/gglabeller - Shiny gadget for labeling points on ggplot
- velocyto-team/velocyto.R - RNA velocity estimation in R
- thibautjombart/adegenet - adegenet: a R package for the multivariate analysis of genetic markers
- koenderks/rcityviews - rcityviews is a user-friendly R interface for creating stylized city maps using OpenStreetMap (www.openstreetmap.org) data, implemented as an R package and a Shiny web application.
- harrelfe/rms - Regression Modeling Strategies
- gojiplus/tuber - 🍠 Access YouTube from R
- jkaupp/tidytuesdays - Entries for tidytuesday
- yiluheihei/microbiomeMarker - R package for microbiome biomarker discovery
- seananderson/glmm-course - Workshop exercises on regression, GLMs, mixed-effects models, and GLMMs in R
- r-quantities/units - Measurement units for R
- openpharma/visR - A package to wrap functionality for plots, tables and diagrams adhering to graphical principles.
- kbroman/broman - R/broman: A package with Karl Broman's personal R code
- datawookie/emayili - An R package for sending email messages.
- GraphicsPrinciples/CheatSheet - Repository for the cheatsheet and R code for generating the examples displayed.
- ThinkR-open/dockerfiler - Easy Dockerfile Creation from R
- privefl/bigstatsr - R package for statistical tools with big matrices stored on disk.
- MicheleNuijten/statcheck - A spellchecker for statistics
- jotech/gapseq - Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks
- emanuelhuber/RGPR - Ground-penetrating radar (GPR) data processing and visualisation: a free and open-source software package (R language)
- davidhodge931/ggblanket - Simplify ggplot2 visualisation
- timelyportfolio/listviewer - R htmlwidget to view lists
- rstudio-conf-2022/ggplot2-graphic-design - "Graphic Design with ggplot2", a 2-day rstudio::conf(2022) Workshop by Cédric Scherer
- mlr-org/batchtools - Tools for computation on batch systems
- r-lib/pillar - Format columns with colour
- MarkEdmondson1234/googleAuthR - Google API Client Library for R. Easy authentication and help to build Google API R libraries with OAuth2. Shiny compatible.
- hrecht/censusapi - R package to retrieve U.S. Census data and metadata via API
- r-lib/withr - Methods For Temporarily Modifying Global State
- koenderks/aRtsy - aRtsy is an R package that implements algorithms for making generative art in a straightforward and standardized manner using 'ggplot2'.
- psychbruce/bruceR - 📦 BRoadly Useful Convenient and Efficient R functions that BRing Users Concise and Elegant R data analyses.
- Pakillo/template - A template for data analysis projects structured as R packages (or not)
- hrbrmstr/docxtractr - ✂️ Extract Tables from Microsoft Word Documents with R
- csdaw/ggprism - ggplot2 extension inspired by GraphPad Prism
- ttvand/Santander-Product-Recommendation - 2nd Place Solution of the Kaggle Competition - Santander Product Recommendation
- ndphillips/VisualResume - An R package for creating a visual resume
- hms-dbmi/scde - R package for analyzing single-cell RNA-seq data
- cran-task-views/WebTechnologies - CRAN Task View: WebTechnologies
- briatte/ida - Introduction to Data Analysis, using R (2013)
- ropensci/osmextract - Download and import OpenStreetMap data from Geofabrik and other providers
- opengeos/whiteboxR - WhiteboxTools R Frontend
- faridcher/ml-course - Starter code of Prof. Andrew Ng's machine learning MOOC in R statistical language
- dselivanov/rsparse - Fast and accurate machine learning on sparse matrices - matrix factorizations, regression, classification, top-N recommendations.
- dreamRs/billboarder - 📊 R Htmlwidget for billboard.js
- theislab/zellkonverter - Conversion between scRNA-seq objects
- rstudio/rstudioapi - Safely access RStudio's API (when available)
- Hy4m/linkET - Everything is Linkable
- GreenleafLab/chromVAR - chromatin Variability Across Regions (of the genome!)
- byaxb/RDataAnalytics - Data Analytics with R, instructed by Xinbo Ai, at Beijing University of Posts and Telecommunications
- shosaco/vistime - Pretty timelines in R.
- ropensci/rcrossref - R client for various CrossRef APIs
- nanxstats/liftr - 🐳 Containerize R Markdown documents for continuous reproducibility
- irudnyts/openai - An R package-wrapper around OpenAI API
- GuangchuangYu/ggimage - 🎨 Use Images in ggplot2
- christophergandrud/d3Network - Tools for creating D3 JavaScript network graphs from R.
- r-lib/coro - Coroutines for R
- mkearney/tidyversity - 🎓 Tidy tools for academics
- CausalInference/gfoRmula - The gfoRmula package implements the parametric g-formula in R. The parametric g-formula (Robins, 1986) uses longitudinal data with time-varying treatments and confounders to estimate the risk or mean of an outcome under hypothetical treatment strategies specified by the user.
- hemberg-lab/scRNA.seq.datasets - Collection of public scRNA-Seq datasets used by our group
- renkun-ken/pipeR - Multi-Paradigm Pipeline Implementation
- RamiKrispin/shinylive-r - A guide for deploying Shinylive R application into Github Pages
- JohnCoene/firebase - Google FIrebase for shiny
- ianmcook/tidyquery - Query R data frames with SQL
- carlos-alberto-silva/rGEDI - rGEDI: An R Package for NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing.
- Appsilon/shiny.i18n - Shiny applications internationalization made easy
- stan-dev/posterior - The posterior R package
- ropensci/webchem - Chemical Information from the Web
- pharmaR/riskmetric - Metrics to evaluate the risk of R packages
- gtatters/Thermimage - R Package for working with radiometric thermal image files and data
- davidski/evaluator - ⚖Open Source Toolkit for Quantitative Risk Assessment
- RLesur/Rcade - Games to procrastinate with RStudio
- mkearney/textfeatures - 👷♂️ A simple package for extracting useful features from character objects 👷♀️
- maxheld83/ghactions - GitHub actions for R and accompanying R package
- junjunlab/GseaVis - An implement R package to visualize GSEA results
- jslefche/piecewiseSEM - Piecewise Structural Equation Modeling in R
- jacob-long/jtools - Tools for summarizing/visualizing regressions and other helpful stuff
- edwindj/chunked - Chunkwise Text-file Processing for 'dplyr'
- duckdb/duckdb-r - The duckdb R package
- swcarpentry/r-novice-gapminder - R for Reproducible Scientific Analysis
- rstudio/chromote - Chrome Remote Interface for R
- eddelbuettel/anytime - Anything to POSIXct or Date Converter
- swcarpentry/r-novice-inflammation - Programming with R
- stefpeschel/NetCoMi - Network construction, analysis, and comparison for microbial compositional data
- r-lib/ymlthis - write YAML for R Markdown, bookdown, blogdown, and more
- ShichenXie/scorecard - Scorecard Development in R, 评分卡
- RevolutionAnalytics/checkpoint - Install R packages from snapshots on checkpoint-server
- mattflor/chorddiag - R interface to D3 chord diagrams
- jeffreyhorner/Rook - A web server interface for R
- HenrikBengtsson/startup - 🔧 R package: startup - Friendly R Startup Configuration
- FantasyFootballAnalytics/ffanalytics - ffanalytics R package
- erdavis1/RoadColors - Plot US roads, coloring each by its designation (e.g. Street, Road, Avenue)
- chr1swallace/coloc - Repo for the R package coloc
- stephenturner/annotables - R data package for annotating/converting Gene IDs
- SteffenMoritz/imputeTS - CRAN R Package: Time Series Missing Value Imputation
- rspatial/raster - R raster package https://rspatial.github.io/raster/reference/raster-package.html
- ropensci/rgbif - Interface to the Global Biodiversity Information Facility API
- JuliaStats/RDatasets.jl - Julia package for loading many of the data sets available in R
- ropensci/dataspice - 🌶️ Create lightweight schema.org descriptions of your datasets
- ranghetti/sen2r - Find, Download and Process Sentinel-2 Data
- jorvlan/raincloudplots - {package} The easy way to create raincloud plots
- PoisonAlien/trackplot - Generate IGV style locus tracks from bigWig files in R
- oswaldosantos/ggsn - R package to add north symbols and scale bars to maps created with ggplot or ggmap
- joshkatz/r-script - A simple little module for passing data from NodeJS to R (and back again).
- jonathanbratt/RBERT - Implementation of BERT in R
- cynkra/constructive - Display Idiomatic Code to Construct Most R Objects
- uptake/pkgnet - R package for analyzing other R packages via graph representations of their dependencies
- strengejacke/sjmisc - Data transformation and utility functions for R
- ropensci/dev_guide - rOpenSci Packages: Development, Maintenance, and Peer Review
- elliottmorris/politicaldata - 🗳📊An R package for acquiring and analyzing political data — including polls, election results, legislator information, and demographic data.
- andrie/miniCRAN - R package to create internally consistent, mini version of CRAN
- trr266/ExPanDaR - R Package for Interactive Panel Data Exploration
- psolymos/pbapply - Adding progress bar to '*apply' functions in R
- pachadotdev/analogsea - Digital Ocean R client
- fawda123/rStrava - Functions to access data from Strava's v3 API.
- datasciencedojo/IntroToTextAnalyticsWithR - Public repo for the Data Science Dojo YouTube tutorial series "Introduction to Text Analytics with R".
- ranalytics/r-tutorials - Приложения к книге "Статистический анализ и визуализация данных с помощью R"
- curso-r/auth0 - Authentication in shinyapps using Auth0 service
- ropensci/MODIStsp - An "R" package for automatic download and preprocessing of MODIS Land Products Time Series
- RLesur/crrri - A Chrome Remote Interface written in R
- psychbruce/ChineseNames - 🀄 Chinese Name Database (1930-2008).
- phil8192/ob-analytics - R package intended for visualisation, analysis and reconstruction of limit order book data
- feddelegrand7/ralger - ralger makes it easy to scrape a website. Built on the shoulders of titans: rvest, xml2.
- edwindj/daff - Diff, patch and merge for data.frames, see http://paulfitz.github.io/daff/
- ropensci/DataPackageR - An R package to enable reproducible data processing, packaging and sharing.
- nicholasjclark/mvgam - {mvgam} R 📦 to fit Dynamic Bayesian Generalized Additive Models for multivariate modeling and forecasting
- MilesMcBain/capsule - An inversion of renv for low effort reproducible R package libraries
- zmeers/ggparliament - Simple parliament plots using ggplot2
- timelyportfolio/d3r - d3.js helpers for R
- talgalili/dendextend - Extending R's Dendrogram Functionality
- nschiett/fishualize - The fishualize package provides color scales and silhouettes for plotting in R based on nature’s most stunning and colorful organisms: teleost fishes (with a few chondrichthyan cameos).
- jonathancornelissen/highfrequency - The highfrequency package contains an extensive toolkit for the use of highfrequency financial data in R. It contains functionality to manage, clean and match highfrequency trades and quotes data. Furthermore, it enables users to: calculate easily various liquidity measures, estimate and forecast volatility, and investigate microstructure noise and intraday periodicity.
- farach/huggingfaceR - Hugging Face state-of-the-art models in R
- zatonovo/futile.logger - A logging package in R similar to log4j
- stan-dev/loo - loo R package for approximate leave-one-out cross-validation (LOO-CV) and Pareto smoothed importance sampling (PSIS)
- ropensci/tic - Tasks Integrating Continuously: CI-Agnostic Workflow Definitions
- rdboyes/forester - An R package for creating publication-ready forest plots.
- mdlincoln/clipr - R functions for reading and writing from the system clipboard
- daroczig/fbRads - Analyze and manage Facebook ads from R using this client library to access their Marketing APIs
- benmarwick/ctv-archaeology - CRAN Task View: Archaeological Science
- trevorld/r-optparse - command-line optional argument parser
- r-transit/tidytransit - R package for working with GTFS data
- r-lib/debugme - Easy and efficient debugging for R packages
- rich-iannone/splitr - Use the HYSPLIT model from inside R and do more with it
- Tazinho/snakecase - 🐍🐍🐍 A systematic approach to parse strings and automate the conversion to snake_case, UpperCamelCase or any other case.
- ShixiangWang/sigminer - 🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html
- ropensci/geojsonio - Convert many data formats to & from GeoJSON & TopoJSON
- pwwang/scplotter - scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy and efficient way.
- ropensci/tsbox - tsbox: Class-Agnostic Time Series in R
- mschubert/clustermq - R package to send function calls as jobs on LSF, SGE, Slurm, PBS/Torque, or each via SSH
- eliocamp/metR - Tools for Easier Analysis of Meteorological Fields
- dreamRs/datamods - Shiny modules to import and manipulate data into an application or addin
- royfrancis/pophelper - An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
- ropensci/osfr - R interface to the Open Science Framework (OSF)
- r-lib/rprojroot - Finding files in project subdirectories
- neuropsychology/psycho.R - An R package for experimental psychologists
- JohnCoene/packer - webpack + npm + R = ❤️
- JohnCoene/g2r - 📈 Grammar of graphics for interactive visualisations
- holgerbrandl/r4intellij - An integration of the R programming language into Intellij IDEA
- ropensci/ghql - GraphQL R client
- paleolimbot/rbbt - R Interface to the Better BiBTex Zotero Connector
- OscarKjell/text - Using Transformers from HuggingFace in R
- ijlyttle/bsplus - Shiny and R Markdown addons to Bootstrap 3
- dankelley/oce - R package for oceanographic processing
- bart6114/jug - jug: A Simple Web Framework for R
- yihui/xfun - Miscellaneous R functions
- stan-dev/cmdstanr - CmdStanR: the R interface to CmdStan
- sjewo/cartogram - r package for cartogram creation
- MangoTheCat/rmdshower - R Markdown template for shower
- kjhealy/revere - Finding Paul Revere
- ehrlinger/ggRandomForests - Graphical analysis of random forests with the randomForestSRC, randomForest and ggplot2 packages.
- alyssafrazee/ballgown - Bioconductor package "ballgown", devel version. Isoform-level differential expression analysis in R.
- trr266/tidycovid19 - {tidycovid19}: An R Package to Download, Tidy and Visualize Covid-19 Related Data
- robertzk/syberia - Syberia: The development framework for R
- quarto-dev/quarto-r - R interface to quarto-cli
- JanMarvin/openxlsx2 - openxlsx2 - read, write and modify xlsx files
- egenn/rtemis - Advanced Machine Learning and Visualization
- cavaunpeu/statistical-rethinking - Solutions for the practice problems
- saezlab/dorothea - R package to access DoRothEA's regulons
- ropensci/jqr - R interface to jq
- renozao/NMF - NMF: A Flexible R package for Nonnegative Matrix Factorization
- profandyfield/discovr - discovr package for R to accompany Discovering Statistics Using R and RStudio
- DoubleML/doubleml-for-r - DoubleML - Double Machine Learning in R
- AndreaCirilloAC/updateR - update your R version in a breeze ( on OSX) √
- tashapiro/TidyTuesday - Data visualizations produced for #TidyTuesdayChallenge, a challenge hosted by R for Data Science.
- SciML/diffeqr - Solving differential equations in R using DifferentialEquations.jl and the SciML Scientific Machine Learning ecosystem
- ropensci/tarchetypes - Archetypes for targets and pipelines
- r-lib/available - Check if a package name is available to use
- rivasiker/ggHoriPlot - A user-friendly, highly customizable R package for building horizon plots in ggplot2
- Novartis/tidymodules - An Object-Oriented approach to Shiny modules
- Kaggle/docker-rstats - Kaggle R docker image
- JulianHill/R-Tutorials - Code from the r tutorial on my blog
- dreamRs/apexcharter - 📊 R Htmlwidget for ApexCharts.js
- schochastics/networkdata - R package containing several network datasets
- robjhyndman/fpp3 - All data sets required for the examples and exercises in the book "Forecasting: principles and practice" (3rd ed, 2020) by Rob J Hyndman and George Athanasopoulos http://OTexts.org/fpp3/. All packages required to run the examples are also loaded.
- mlr-org/mlr3pipelines - Dataflow Programming for Machine Learning in R
- JesseVent/crypto - Cryptocurrency Historical Market Data R Package
- CornellLabofOrnithology/auk - Working with eBird data in R
- vue-r/vueR - vue.js for R
- tidyverse/hms - A simple class for storing time-of-day values
- nrennie/messy - R package to make a data frame messy and untidy.
- noamross/nyhackr-docker-talk - Slides, Code, and Links to Resources from "Docker for the User," delivered at nyhackr 2018-07-11
- mattansb/Structural-Equation-Modeling-foR-Psychologists - Lesson files used in the Structural Equation Modeling for Psychologists.
- dreamRs/prefixer - Prefix function with their namespace & other development tools
- trulia/choroplethr - choroplethr simplifies the creation of choropleths (thematic maps) in R
- samterfa/openai - This R package provides an SDK to the Open AI API
- r-lib/ellipsis - Tools for Working with ...
- PheWAS/PheWAS - The PheWAS R package
- google/patrick - Parameterized testing in R is kind of cool!
- rstudio/rsconnect - Publish Shiny Applications, RMarkdown Documents, Jupyter Notebooks, Plumber APIs, and more
- metrumresearchgroup/mrgsolve - Simulate from ODE-based population PK/PD and QSP models in R
- grunwaldlab/metacoder - Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data
- dlab-berkeley/R-Fundamentals-Legacy - D-Lab's 12 hour introduction to R Fundamentals. Learn how to create variables and functions, manipulate data frames, make visualizations, use control flow structures, and more, using R in RStudio.
- coolbutuseless/emphatic - Highlighting R output in the console
- cloudly/Play-Econometrics-with-R - a brochure about "Play Econometrics with R"
- wlandau/crew - A distributed worker launcher
- TatevKaren/mathematics-statistics-for-data-science - Mathematical & Statistical topics to perform statistical analysis and tests; Linear Regression, Probability Theory, Monte Carlo Simulation, Statistical Sampling, Bootstrapping, Dimensionality reduction techniques (PCA, FA, CCA), Imputation techniques, Statistical Tests (Kolmogorov Smirnov), Robust Estimators (FastMCD) and more in Python and R.
- seankross/lego - 😃 R data package featuring every Lego set from 1970 to 2015
- ropensci/osmplotr - Data visualisation using OpenStreetMap objects
- openpharma/mmrm - Mixed Models for Repeated Measures (MMRM) in R.
- mdneuzerling/lambdr - Run R containers on AWS Lambda
- drostlab/philentropy - Information Theory and Distance Quantification with R
- thomasp85/farver - High Performance Colourspace Manipulation in R
- seanchrismurphy/A-Psychologists-Guide-to-R - A repository containing the course notes and worked examples for a six week course in the R statistical programming language aimed at helping psychology students and faculty to learn R. This course was taught live at the University of Melbourne, Australia in 2016.
- quandl/quandl-r - This is Quandl's R Package
- m-clark/mixed-models-with-R - Covers the basics of mixed models, mostly using @lme4
- EmilHvitfeldt/prismatic - color manipulation R package Simply and Tidy
- WinVector/wrapr - Wrap R for Sweet R Code
- r-lib/evaluate - A version of eval for R that returns more information about what happened
- mlr-org/mlr3proba - Probabilistic Learning for mlr3
- datacamp/courses-introduction-to-r - Introduction to R by Jonathan Cornelissen
- cstawitz/roomba - General purpose API response tidier
- WLOGSolutions/RSuite - The most complete R development and data science platform.
- richfitz/stevedore - ☁️🚣🐳☁️ Docker client for R
- nrennie/aRt - R package to create generative art.
- ndphillips/FFTrees - An R package to create and visualise fast-and-frugal decision trees (FFTs)
- karoliskoncevicius/basetheme - Themes for base plotting system in R
- jimmyday12/fitzRoy - A set of functions to easily access AFL data
- HenrikBengtsson/Wishlist-for-R - Features and tweaks to R that I and others would love to see - feel free to add yours!
- google/GeoexperimentsResearch - An open-source implementation of the geo experiment analysis methodology developed at Google. Disclaimer: This is not an official Google product.
- rstudio/sortable - R htmlwidget for Sortable.js
- r-dbi/RMariaDB - An R interface to MariaDB
- MRCIEU/gwasglue - Linking GWAS data to analytical tools in R
- MatsuuraKentaro/Bayesian_Statistical_Modeling_with_Stan_R_and_Python - Kentaro Matsuura (2022). Bayesian Statistical Modeling with Stan, R, and Python. Springer, Singapore.
- ardata-fr/mschart - 📊 mschart: office charts from R
- 16EAGLE/moveVis - An R package providing tools to visualize movement data (e.g. from GPS tracking) and temporal changes of environmental data (e.g. from remote sensing) by creating video animations.
- svalvaro/drawCell - R package to create cell pictures.
- rkillick/changepoint - A place for the development version of the changepoint package on CRAN.
- renanxcortes/springerQuarantineBooksR - Download all books made available by Springer during the COVID-19 quarantine!
- lindbrook/cholera - R Package for Analyzing John Snow's 1854 Cholera Map
- jennybc/repurrrsive - Recursive lists to use in teaching and examples, because there is no mtcars for lists.
- hadley/babynames - An R package containing US baby names from the SSA
- ANTsX/ANTsR - R interface to the ANTs biomedical image processing library
- r-dbi/DBI - A database interface (DBI) definition for communication between R and RDBMSs
- USEPA/elevatr - An R package for accessing elevation data
- r-lib/keyring - 🔐 Access the system credential store from R
- mllg/batchtools - Tools for computation on batch systems
- futureverse/parallelly - R package: parallelly - Enhancing the 'parallel' Package
- shikokuchuo/mirai - mirai - Minimalist Async Evaluation Framework for R
- joachim-gassen/ExPanDaR - R Package for Interactive Panel Data Exploration
- joachim-gassen/tidycovid19 - {tidycovid19}: An R Package to Download, Tidy and Visualize Covid-19 Related Data
- nteetor/yonder - A reactive web framework built on shiny
- carlganz/rintrojs - Wrapper for the Intro.js library
- R-ArcGIS/r-sample-tools - Sample tools illustrating R usage in geoprocessing scripts
- jseidman/hadoop-R - Example code for running R on Hadoop
- geoarrow/geoarrow-r - Extension types for geospatial data for use with 'Arrow'
- cloudyr/googleComputeEngineR - An R interface to the Google Cloud Compute API, for launching virtual machines
- ThinkR-open/fakir - Create Fake Data in R for tutorials
- vincentarelbundock/marginaleffects - R package to compute and plot predictions, slopes, marginal means, and comparisons (contrasts, risk ratios, odds, etc.) for over 100 classes of statistical and ML models. Conduct linear and non-linear hypothesis tests, or equivalence tests. Calculate uncertainty estimates using the delta method, bootstrapping, or simulation-based inference
- mtennekes/cols4all - Colors for all (R package)
- ncborcherding/scRepertoire - A toolkit for single-cell immune profiling
- richarddmorey/BayesFactor - BayesFactor R package for Bayesian data analysis with common statistical models.
- oscarperpinan/spacetime-vis - Sources of the book "Displaying time series, spatial and space-time data with R" (1st Edition)
- ZeBang/tensorTS - R package for autoregressive, reduced-rank, and factor models in time series.
- tidyverse/elmer - Call LLM APIs from R
- statsmaths/cleanNLP - R package providing annotators and a normalized data model for natural language processing
- tkonopka/umap - Uniform Manifold Approximation and Projection - R package
- HenrikBengtsson/future - 🚀 R package: future: Unified Parallel and Distributed Processing in R for Everyone
- ropensci/rtweet - 🐦 R client for interacting with Twitter's [stream and REST] APIs
- Veronica0206/nlpsem - R package for analyzing nonlinear longitudinal processes in the structural equation modeling framework
- HenrikBengtsson/progressr - 三 R package: An Inclusive, Unifying API for Progress Updates
- RomanTsegelskyi/rbooks - A curated list of #rstats books
- HenrikBengtsson/future.apply - 🚀 R package: future.apply - Apply Function to Elements in Parallel using Futures
- prestodb/RPresto - DBI-based adapter for Presto for the statistical programming language R.
- hadley/lazyeval - Lazy evaluation: an alternative to non-standard evaluation (NSE) for R
- r-lib/rray - Simple Arrays
- nredell/forecastML - An R package with Python support for multi-step-ahead forecasting with machine learning and deep learning algorithms
- maju116/platypus - R package for object detection and image segmentation.
- line/conflr - Post R Markdown documents to Confluence
- jolars/eulerr - Area-Proportional Euler and Venn Diagrams with Ellipses
- XD-DENG/ECharts2Shiny - To insert interactive charts from ECharts into R Shiny applications (在R Shiny app中插入ECharts可交互图形)
- miraisolutions/xlconnect - XLConnect: Excel Connector for R
- Torvaney/ggsoccer - Plot soccer event data in R/ggplot2
- rubenarslan/codebook - Cook rmarkdown codebooks from metadata on R data frames
- robjhyndman/fpp3package - All data sets required for the examples and exercises in the book "Forecasting: principles and practice" (3rd ed, 2020) by Rob J Hyndman and George Athanasopoulos http://OTexts.org/fpp3/. All packages required to run the examples are also loaded.
- walkerke/crsuggest - Get appropriate CRS suggestions for your spatial data in R
- sewardlee337/finreportr - R package - Financial Data from U.S. Securities and Exchange Commission
- HenrikBengtsson/parallelly - R package: parallelly - Enhancing the 'parallel' Package
- rweekly/rweekly.org - R Weekly
- devOpifex/ambiorix - 🖥️ Web framework for R
- mikelove/bioc-refcard - Bioconductor cheat sheet
- greta-dev/greta - simple and scalable statistical modelling in R
- daroczig/logger - A lightweight, modern and flexible, log4j and futile.logger inspired logging utility for R
- duckdblabs/duckplyr - A drop-in replacement for dplyr, powered by DuckDB for performance.
- tomaztk/Useless_R_functions - Useless R Functions. That's it
- tidyverse/nycflights13 - An R data package containing all out-bound flights from NYC in 2013 + useful metdata
- randyzwitch/RSiteCatalyst - R package to access Adobe Analytics Reporting API v1.4
- isinaltinkaya/gptchatteR - An experimental and unofficial wrapper for interacting with OpenAI GPT models in R.
- vincentarelbundock/modelsummary - Beautiful and customizable model summaries in R.
- rte-antares-rpackage/manipulateWidget - Add More Interactivity to htmlwidgets
- jacob-long/interactions - A comprehensive, user-friendly toolkit for visualizing and analyzing statistical interactions. A spinoff from the
jtools
package. - beanumber/etl - R package to facilitate ETL operations
- rstudio/keras - R Interface to Keras
- hughjonesd/huxtable - An R package to create styled tables in multiple output formats, with a friendly, modern interface.
- Keiku/kaggle-airbnb-recruiting-new-user-bookings - 2nd Place Solution in Kaggle Airbnb New User Bookings competition
- JonasSchroeder/InstaCrawlR - Crawl public Instagram data using R scripts without API access token. See InstaCrawlR Instructions.pdf
- MangoTheCat/goodpractice - Advice on R Package Building
- LTLA/SingleR - Clone of the Bioconductor repository for the SingleR package.
- mattansb/Practical-Applications-in-R-for-Psychologists - Lesson files for Practical Applications in R for Psychologists.
- hrbrmstr/sergeant - 💂♂️ Tools to Transform and Query Data with 'Apache' 'Drill'
- matloff/regtools - Various tools for linear, nonlinear and nonparametric regression.
- cloudyr/rmote - Utilities for running R on a remote server
- ropensci/tabulizer - Bindings for Tabula PDF Table Extractor Library
- christophM/iml - iml: interpretable machine learning R package
- lockedata/starters - R Package 📦 for initializing projects for various R activities 🔩
- ColinFay/attempt - Tools for defensive programming in R
- nexr/RHive - RHive is an R extension facilitating distributed computing via Apache Hive.
- bhaskarvk/leaflet.extras - Extra functionality for leaflet R package.
- jbisanz/qiime2R - Import qiime2 artifacts to R
- globeandmail/startr - A template for data journalism in R
- hrbrmstr/statebins - Alternative to choropleths of US States ala http://bit.ly/statebins
- edgararuiz-zz/dbplot - Simplifies plotting of database and sparklyr data
- beechung/Latent-Factor-Models - R functions for fitting latent factor models with internal computation in C/C++
- r-lib/desc - Manipulate DESCRIPTION files
- crsh/papaja - papaja (Preparing APA Journal Articles) is an R package that provides document formats to produce complete APA manuscripts from RMarkdown-files (PDF and Word documents) and helper functions that facilitate reporting statistics, tables, and plots.
- ropensci/assertr - Assertive programming for R analysis pipelines
- rexyai/rsparse - Fast and accurate machine learning on sparse matrices - matrix factorizations, regression, classification, top-N recommendations.
- swarm-lab/Rvision - Basic computer vision library for R
- grantmcdermott/plot2 - Lightweight extension of base R's plot system
- gadenbuie/countdown - ⏲ countdown timer for R Markdown slides and HTML docs
- emitanaka/anicon - Animated icons for R markdown and Shiny apps
- coolbutuseless/tickle - Easily create UIs in base R
- theislab/kBET - An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.
- mkearney/pkgverse - 📦🔭🌠 Create your own universe of packages à la tidyverse
- facebookexperimental/Robyn - Robyn is an experimental, AI/ML-powered and open sourced Marketing Mix Modeling (MMM) package from Meta Marketing Science. Our mission is to democratise modeling knowledge, inspire the industry through innovation, reduce human bias in the modeling process & build a strong open source marketing science community.
- avehtari/BDA_R_demos - Bayesian Data Analysis demos for R
- syberia/syberia - Syberia: The development framework for R
- MarkEdmondson1234/ga-dashboard-demo - A demo on how to build your own Google Analytics dashboard with R, Shiny and MySQL
- leeper/meme - Meme Generation in R
- SMAPPNYU/smappR - R tools for analysis of Twitter data
- COVAIL/cognizer - R package to call IBM Watson services.
- r-lib/pak - A fresh approach to package installation
- leeper/rio - A Swiss-Army Knife for Data I/O
- RConsortium/OOP-WG - S7: a new OO system for R
- soodoku/tuber - 🍠 Access YouTube from R
- stephenturner/qqman - An R package for creating Q-Q and manhattan plots from GWAS results
- corynissen/fitbitScraper - R package to scrape fitbit data
- yihui/printr - Some (magical) printing methods for knitr
- robjhyndman/anomalous-acm - Anomalous time series package for R (ACM)
- cpsievert/pitchRx - Tools for scraping MLB Gameday data and Visualizing PITCHf/x
- emilyriederer/projmgr - R-based project management tools
- dlab-berkeley/R-Deep-Learning - Workshop (6 hours): Deep learning in R using Keras. Building & training deep nets, image classification, transfer learning, text analysis, visualization
- yihui/recharts - An R Interface to Apache ECharts (incubating)
- vertica/ddR - Standard API for Distributed Data Structures in R
- richfitz/storr - 📦 Object cacher for R
- jmstanto/data-science-r - R code and documentation for "Introduction to Data Science" by Jeffrey Stanton
- Non-Contradiction/JuliaCall - Embed Julia in R
- rladies/starter-kit - Some useful R-Ladies files 💜 🌍
- Bart6114/jug - jug: A Simple Web Framework for R
- dlab-berkeley/R-Fundamentals - D-Lab's 12 hour introduction to R Fundamentals. Learn how to create variables and functions, manipulate data frames, make visualizations, use control flow structures, and more, using R in RStudio.
- ropensci-archive/bomrang -
⚠️ ARCHIVED⚠️ Australian government Bureau of Meteorology (BOM) data client for R - xfim/ggmcmc - Graphical tools for analyzing Markov Chain Monte Carlo simulations from Bayesian inference
- rstudio-conf-2020/big-data - 🔧 Use dplyr to analyze Big Data 🐘
- r-lib/gargle - Infrastructure for calling Google APIs from R, including auth
- RinteRface/fullPage - 📄 fullPage.js, pagePiling.js and multiScroll.js for shiny
- quanteda/stopwords - Multilingual Stopword Lists in R
- leonawicz/tabr - R package: tabr. Notation-based and tidy music data analysis and transcription.
- crowding/vadr - Making R a better language
- trinker/lexicon - A data package containing lexicons and dictionaries for text analysis
- RinteRface/shinybulma - 🌐 Bulma.io for Shiny
- leifeld/texreg - Conversion of R Regression Output to LaTeX or HTML Tables
- genome/sciclone - An R package for inferring the subclonal architecture of tumors
- earowang/hts - Hierarchical and Grouped Time Series
- prioritizr/prioritizr - Systematic conservation prioritization in R
- pablobarbera/streamR - Dev version of streamR package: Access to Twitter Streaming API via R
- njtierney/brolgar - BRowse Over Longitudinal Data Graphically and Analytically in R
- lgatto/MSnbase - Base Classes and Functions for Mass Spectrometry and Proteomics
- keberwein/blscrapeR - A tool to gather, analyze and visualize data from the Bureau of Labor Statistics (BLS) API. Functions include segmentation, geographic analysis and visualization.
- hadley/secure - Secure private R data in public packages
- datacarpentry/r-raster-vector-geospatial - Introduction to Geospatial Raster and Vector Data with R
- Azure/doAzureParallel - A R package that allows users to submit parallel workloads in Azure
- Azure/azureml-sdk-for-r - Azure Machine Learning SDK for R
- rezakj/iCellR - Single (i) Cell R package (iCellR) is an interactive R package to work with high-throughput single cell sequencing technologies (i.e scRNA-seq, scVDJ-seq, scATAC-seq, CITE-Seq and Spatial Transcriptomics (ST)).
- mwip/beautifyR - RStudio addin for formatting Rmarkdown tables
- christophsax/seasonal - R interface to X-13ARIMA-SEATS
- ropensci-archive/umapr - ⛔ ARCHIVED ⛔ Wraps UMAP Algorithm for Dimension Reduction
- emitanaka/shinycustomloader - Add a custom loader for R shiny
- dipanjanS/learning-social-media-analytics-with-r - This repository contains code and bonus content which will be added from time to time for the book "Learning Social Media Analytics with R" by Packt
- delta-rho/trelliscope - Detailed Visualization of Large Complex Data in R
- ujjwalkarn/xda - R package for exploratory data analysis
- ropensci/RefManageR - R package RefManageR
- mjockers/syuzhet - An R package for the extraction of sentiment and sentiment-based plot arcs from text
- easystats/effectsize - 🐉 Compute and work with indices of effect size and standardized parameters
- mlr-org/mlr3book - mlr3 manual
- rstudio/bigdataclass - Two-day workshop that covers how to use R to interact databases and Spark
- piersyork/owidR - An R Package for Importing Data from Our World in Data
- cbailiss/pivottabler - Create Pivot Tables natively in R
- malcolmbarrett/ggdag -
↙️ ↘️ An R package for working with causal directed acyclic graphs (DAGs) - SymbolixAU/googleway - R Package for accessing and plotting Google Maps
- ropensci/googleLanguageR - R client for the Google Translation API, Google Cloud Natural Language API and Google Cloud Speech API
- giswqs/whiteboxR - WhiteboxTools R Frontend
- ropensci-archive/rorcid -
⚠️ ARCHIVED⚠️ A programmatic interface the Orcid.org API - minimaxir/reddit-bigquery - Code + Jupyter notebook for analyzing and visualizing Reddit Data quickly and easily
- Roche/rtables - Reporting tables with R
- christophsax/tsbox - tsbox: Class-Agnostic Time Series in R
- briatte/ggnetwork - Geoms to plot networks with ggplot2
- r-lib/rcmdcheck - Run R CMD check from R and collect the results
- boboppie/kruschke-doing_bayesian_data_analysis - John K. Kruschke's Doing Bayesian Data Analysis: A Tutorial with R and BUGS
- riatelab/linemap - ♒ Create maps made of lines
- devOpifex/g2r - Grammar of graphics for interactive visualisation using G2.js
- singmann/afex - Analysis of Factorial EXperiments (R package)
- davebraze/FDBeye - R tools for eyetracker workflows.
- Robinlovelace/geocompr - Open source book: Geocomputation with R
- r-spatial/mapview - Interactive viewing of spatial data in R
- radiant-rstats/radiant - Business analytics using R and Shiny. The radiant app combines the menus from radiant.data, radiant.design, radiant.basics, radiant.model, and radiant.multivariate.
- SebKrantz/collapse - Advanced and Fast Data Transformation in R
- ewenharrison/finalfit - Quickly create elegant regression results tables and plots when modelling in R
- eddelbuettel/drat - Drat R Archive Template
- VanLoo-lab/ascat - ASCAT copy number R package
- EagerAI/fastai - R interface to fast.ai
- vimc/orderly - 🏥🚑 Lightweight Reproducible Reporting for R
- MarkEdmondson1234/searchConsoleR - R interface with Google Search Console API v3, including Search Analytics.
- SymbolixAU/mapdeck - R interface to Deck.gl and Mapbox
- USGS-R/dataRetrieval - This R package is designed to obtain USGS or EPA water quality sample data, streamflow data, and metadata directly from web services. See: https://rconnect.usgs.gov/dataRetrieval/
- AdrianAntico/RemixAutoML - R package for automation of machine learning, forecasting, feature engineering, model evaluation, model interpretation, recommenders, and EDA.
- hughjonesd/santoku - A versatile cutting tool for R
- tidymodels/TMwR - Code and content for "Tidy Modeling with R"
- MilesMcBain/friendlyeval - A friendly interface to tidyeval/rlang that will excuse itself when you're done.
- timoast/signac - R toolkit for the analysis of single-cell chromatin data
- jennybc/debugging - Talk about general debugging strategies. How to be less confused and frustrated.
- xrobin/pROC - Display and analyze ROC curves in R and S+
- TommyJones/textmineR - An aid for text mining in R, with a syntax that should be familiar to experienced R users. Provides a wrapper for several topic models that take similarly-formatted input and give similarly-formatted output. Has additional functionality for analyzing and diagnostics for topic models.
- quanteda/readtext - an R package for reading text files
- ropensci/rplos - R client for the PLoS Journals API
- ropensci/fulltext - Search across and get full text for OA & closed journals
- ropensci/rorcid - A programmatic interface the Orcid.org API
- Ironholds/pystr - Python String Methods in R.
- cboettig/template - 📦 A template for my research projects, based on the R package structure
- Ronggui/RQDA - R-based Qualitative Data Analysis
- pablobarbera/instaR - Dev version of instaR package: Access to Instagram API via R
- nflverse/nflfastR-data - builds play by play and player stats for nflverse/nflverse-data
- jthaman/ciTools - An R Package for Quick Uncertainty Intervals
- jasdumas/shinyLP - A R package for Bootstrap Components to make Landing Home Pages for Shiny 🌐
- adletaw/captioner - an R package for generating figure/table numbers and captions, especially for Rmd docs
- trinker/reports - An R package to assist in the workflow of writing academic articles and other reports
- gimoya/theBioBucket-Archives - R-Code used in my blog theBioBucket
- rstudio/distill - Distill for R Markdown
- nik01010/dashboardthemes - Now on CRAN: custom theme support for R Shinydashboard applications.
- avehtari/ROS-Examples - Regression and other stories R examples
- ropensci-archive/learngganimate - ⛔ ARCHIVED ⛔ A living, breathing community exploration of the gganimate R package. A rOpenSci #ozunconf2018 project
- R-ArcGIS/r-bridge - Bridge library to connect ArcGIS and R, including arcgisbinding R library.
- jburkhardt/RAdwords - Loading Google Adwords Data into R
- ropensci/bomrang - Australian government Bureau of Meteorology (BOM) data client for R
- cosname/art-r-translation - 《R语言编程艺术》翻译项目文件
- andrewheiss/colourlovers - 🎨 📦 R Client for the COLOURlovers API
- ropensci/ezknitr - Avoid the typical working directory pain when using 'knitr'
- herbps10/reactor - Interactive notebooks for R
- lockedata/datasauRus - R Package 📦 Containing the Datasaurus Dozen datasets 📊
- JohnCoene/ambiorix - 🖥️ Web framework for R
- hrbrmstr/splashr - 💦 Tools to Work with the 'Splash' JavaScript Rendering Service in R
- gshs-ornl/wbstats - wbstats: An R package for searching and downloading data from the World Bank API
- ropensci/ckanr - R client for the CKAN API
- dbdahl/rscala - The Scala interpreter is embedded in R and callbacks to R from the embedded interpreter are supported. Conversely, the R interpreter is embedded in Scala.
- atlanhq/rLandsat - R Package to make Landsat8 data accessible
- amrrs/animated_bar_charts_in_R - Code to demo how to build Animated Bar Charts in R
- xiaodaigh/disk.frame - Fast Disk-Based Parallelized Data Manipulation Framework for Larger-than-RAM Data
- tjmahr/WrapRmd - RStudio addin for wrapping RMarkdown paragraphs
- ropensci-archive/monkeylearn - ⛔ ARCHIVED ⛔ 🐒 R package for text analysis with Monkeylearn 🐒