Open Source Algorithms

* Fast C++ library for linear algebra (matrix maths) and scientific computing * Easy to use functions and syntax, deliberately similar to Matlab / Octave * Uses template meta-programming techniques to increase efficiency * Provides user-friendly wrappers for OpenBLAS, Intel MKL, LAPACK, ATLAS, ARPACK, SuperLU and FFTW libraries * Useful for machine learning, pattern recognition, signal processing, bioinformatics, statistics, finance, etc. * Downloads: http://arma.sourceforge.net/download.html * Documentation: http://arma.sourceforge.net/docs.html * Bug reports: http://arma.sourceforge.net/faq.html * Git repo: https://gitlab.com/conradsnicta/armadillo-code

Dlib is a C++ toolkit containing machine learning algorithms and tools for creating complex software in C++ to solve real world problems.

* Fast GPU linear algebra library (matrix maths) for the C++ language, aiming towards a good balance between speed and ease of use * Provides high-level syntax and functionality deliberately similar to Matlab * Provides an API that is aiming to be compatible with Armadillo for easy transition between CPU and GPU linear algebra code * Useful for algorithm development directly in C++, or quick conversion of research code into production environments * Distributed under the permissive Apache 2.0 license, useful for both open-source and proprietary (closed-source) software * Can be used for machine learning, pattern recognition, computer vision, signal processing, bioinformatics, statistics, finance, etc * Downloads: http://coot.sourceforge.io/download.html * Documentation: http://coot.sourceforge.io/docs.html * Bug reports: http://coot.sourceforge.io/faq.html * Git repo: https://gitlab.com/conradsnicta/bandicoot-code

jMetal is an object-oriented Java-based framework for solving multi-objective optimization problems with metaheuristics.

C++ BigInt class that enables the user to work with arbitrary precision integers. Latest Version: 10.3 (2019-03-06)

Libcutils provides a self-contained set of fundamental routines which are essential to basically any Unix utility or daemon application written in C. The library provides fundamental data structures such as lists, hash-maps, strings and parsing functions for JSON or the typical dot-file based configuration data. The following list summarizes the currently supported functionality: * length delimited instead of NULL terminated strings * memory management based on reference counting * several list processing functions like iterators and map-reduce * support of [Ideal Hash Tries](http://infoscience.epfl.ch/record/64398/files/idealhashtrees.pdf) for highly efficient hash map data structures * parsers for [JSON](http://json.org) data and the text configuration files found in Unix system * doubly linked circular lists for reliable event queues * support for test and debugging of memory management problems such as memory leaks

LASS : Library of Assembled Shared Source. Library of C++ code for scientific purposes.

PileWorks provides the organizational structure for coordinating several different projects which approach some aspect of Pile Technology. PileWorks defines a set of interfaces and implements some basic infrastructure for Pile engines and agents.

Fiona is a tool to automatically analyze the interactional behavior of a given oWFN. It provides two techniques: it checks for the controllability of the given net by computing the interactiong graph and it calculates the operating guideline for the net.

Struct-Pie (Structures Pie) is a set of C shared libraries to implement data structures and algorithms so that they can be used/integrated easily into C projects. LIFO & FIFO Stack, Binary Search Tree, Priority Queue and a Hash Table are implemented and included in this package. Future releases will have many other data structures. The hash table in this package uses separate chaining to avoid collision. In the "hash_table" directory, the hash table implementation uses linked lists. While in "HashBSTree" directory, a hash table with a binary tree in each index is implemented for faster lookup in large data. The stack, the tree and the hash table accept int, float and char* data type To look at the python library : https://github.com/mnoorfawi/struct-pie

The Flexible Registration and Evaluation Engine (f.r.e.e.) allows the composition, evaluation and optimization of image processing/registration algorithms. It also aims to boost the exchangeability and comparability of data and algorithms in research.

Tpl makes it easy to serialize your C data using just a handful of API functions. The data is stored in its native binary form for maximum efficiency. C, Perl and XML supported. Data is portable across CPU types and OS's from Unix to Mac to Windows.

ACADO Toolkit is a software environment and algorithm collection for automatic control and dynamic optimization. It provides a general framework for using a great variety of algorithms for direct optimal control, including model predictive control, state and parameter estimation and robust optimization. ACADO Toolkit is implemented as self-contained C++ code and comes along with user-friendly MATLAB interface. The object-oriented design allows for convenient coupling of existing optimization packages and for extending it with user-written optimization routines.

Libface is a cross platform framework for developing face recognition algorithms and testing its performance.

In silico evolution of biochemical networks using a genetic algorithm combined with a rule-based biochemical network model.