Browse free open source Java Bio-Informatics Software and projects below. Use the toggles on the left to filter open source Java Bio-Informatics Software by OS, license, language, programming language, and project status.

  • MongoDB Atlas runs apps anywhere Icon
    MongoDB Atlas runs apps anywhere

    Deploy in 115+ regions with the modern database for every enterprise.

    MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
    Start Free
  • Deliver secure remote access with OpenVPN. Icon
    Deliver secure remote access with OpenVPN.

    Trusted by nearly 20,000 customers worldwide, and all major cloud providers.

    OpenVPN's products provide scalable, secure remote access — giving complete freedom to your employees to work outside the office while securely accessing SaaS, the internet, and company resources.
    Get started — no credit card required.
  • 1
    BioQuery is a bioinformatics tool that acts as a query builder for genetic, protein, publication, and other biomedical databases. BioQuery is also an update service that periodically resubmits saved searches and sends you new data as it is found.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 2
    Talisman is an interpreter for a logical markup language. This language contains the content and logic of a web (or, in the future, Java Swing) based user interface, including arbitrary datatypes and processing actions.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 3
    Taverna 1.x (archived)

    Taverna 1.x (archived)

    Scientific workflow system

    Taverna is *no longer* hosted on SourceForge, but has moved to the Apache Software Foundation: https://taverna.apache.org These pages and mailing list archives are provided for *archival purposes* for older Taverna 1.x releases. See https://taverna.apache.org/download/ for the latest releases from Apache Taverna.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 4
    XMPP Web Services for Java (XWS4J) is an implementation of machine to machine communication over XMPP. The communicated content is encoded in XML, according to customized definitions of input and output in W3C XML Schemata.
    Downloads: 0 This Week
    Last Update:
    See Project
  • No-Nonsense Code-to-Cloud Security for Devs | Aikido Icon
    No-Nonsense Code-to-Cloud Security for Devs | Aikido

    Connect your GitHub, GitLab, Bitbucket, or Azure DevOps account to start scanning your repos for free.

    Aikido provides a unified security platform for developers, combining 12 powerful scans like SAST, DAST, and CSPM. AI-driven AutoFix and AutoTriage streamline vulnerability management, while runtime protection blocks attacks.
    Start for Free
  • Previous
  • You're on page 1
  • Next
Want the latest updates on software, tech news, and AI?
Get latest updates about software, tech news, and AI from SourceForge directly in your inbox once a month.