Open Source Algorithms

Identification and scoring of cancer markers by Immunohistochemistry has been shown to be of value in determining the aggressiveness of specific cancers, as well as in predicting patient outcome for many cancer types. Despite its routine clinical use, a problem with the standard scoring method is the inherent subjectivity and variability of purely visual inspection. To diminish this visual perception biasing, IHC profiler has been developed as a standard automated scoring tool. -x-x-x-x-x-x-x- Full Publication and Citation: Varghese F, Bukhari AB, Malhotra R, De A (2014) IHC Profiler: An Open Source Plugin for the Quantitative Evaluation and Automated Scoring of Immunohistochemistry Images of Human Tissue Samples. PLoS ONE 9(5): e96801. doi:10.1371/journal.pone.0096801 Link: http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0096801 -x-x-x-x-x-x-x- Your feedback would be highly appreciated. Please rate so we can work on improving it further. Thank you!

iat is Iso9660 Analyzer Tool, this tool have engine for detect many structure of image file

C++ Library of Abstract Algebra concepts and arithmetic algorithms defined in terms of these concepts, using Instigate Generic Programming Methodology. Based on this library we plan to develop Linear Algebra and Optimization concepts and algorithms.

The Adobe Source Libraries (ASL) are a collection of C++ libraries building foundation technology to allow the construction of commercial applications by assembling generic algorithms through declarative descriptions.

La suite logicielle Monia est destinée à l'apprentissage de l'algorithmique en français. Elle permet de fabriquer un exécutable à partir d'un organigramme, en passant par un programme procédural écrit en pseudo-langage.

PHPXref is a developers tool, written in Perl, that will cross reference and extract inline documentation from a collection of PHP scripts. It generates simple HTML output suitable for browsing offline.

Game Toolbox is a C# assembly designed to facilitate the creation of games and game prototypes. It contains no graphics code, does not depend on XNA, and is Mono-compatible. It provides implementations of A*, GOAP, a genetic algorithm, and more.

Cutting Problem solved by Genetic algorithms. The goal is to cut a rectangular plate of material into more smaller rectangles. The cuts must be rectangular and guillotinable.

This library contains Java code for several Read-Write Locks: - ScalableRWLock: A rw-lock that scales with the number of threads doing read-lock. - ScalableRWLockS: Similar to above but different implementation. - ScalableStampedRWLock: An hybrid of the ScalableRWLock and the StampedLock provided in JDK 8, which provides good overall performance. - FAARWLock: Uses a Fetch-And-Add operation for the read-lock which means it is not so scalable as ScalableRWLock but it is still faster than classical implementations

User AES-128 bit encryption in counter mode of operation. supports interactive mode of operation and command line mode of operation.

YACS (Yet Another Constraint Solver) is a Java library and an object-oriented framework for constraint solvers. It supports propagating and solving of constraint satisfaction problems with finite and infinite domains (discrete values and real intervals).

Java Machine Learning Library is a library of machine learning algorithms and related datasets. Machine learning techniques include: clustering, classification, feature selection, regression, data pre-processing, ensemble learning, voting, ...

This software provides an easy graphical way to encrypt your text documents from source code , text files ,scripts even jpeg files .It is a enhanced version of my earlier project https://sourceforge.net/p/xorencrypt which used win32 GUI . This is a demonstration of working of XOR encryption which was used by Germans in World War II (http://en.wikipedia.org/wiki/Lorenz_cipher) . Besides from XOR'ing the message with password after every encryption the key changes pseudorandomly. The password you provide is hashed ( SHA256 ) and saved into the encrypted file to check if the password provided is correct.This algorithm has limitations in general more the numbers of relative characters in the password to plaintext more secure will be the encryption. XOR encrypt has a 3.5 of 5 editors rating from softpedia http://www.softpedia.com/get/Security/Encrypting/XOR-Encrypt.shtml

minidjvu is a DjVu encoder for black-and-white images.

Es un editor de código ligero y fácil de usar, diseñado específicamente para la programación en Python. Su interfaz intuitiva permite a los usuarios, tanto principiantes como experimentados, escribir, editar y ejecutar código de manera eficiente.

Programmer's library for random numbers. Also random number generator testing code. Intended for simulation, games and "Monte-Carlo" algorithms.

GFP use Genetic Programming and LISP-like language for growing program.

OpenANN is a basic artificial neural network toolset. It is not being actively maintained. For performance neural networking, consider an alternative (such as https://sourceforge.net/projects/openann-project or https://www.tensorflow.org)

OpenDino is an open source Java platform for optimization, design of experiment and learning. It provides a graphical user interface (GUI) and a platform which simplifies integration of new algorithms as "Modules". Implemented Modules Evolutionary Algorithms: - CMA-ES - (1+1)-ES - Differential Evolution Deterministic optimization algorithm: - SIMPLEX Learning: - a simple Artificial Neural Net Optimization problems: - test functions - interface for executing other programs (solvers) - parallel execution of problems - distributed execution of problems via socket connection between computers Others: - data storage - data analyser and viewer

OptFlow is a C++ -based library for motion detection. It implements the classical Lucas-Kanade algorithm and a more advanced algorithm by Proesmans et.al. Several warping and morphing methods using the computed motion fields are also implemented.

An experimental language API and interpreter which combine ideas from functional programming and graph theory.

A univariate and multivariate analysis UI. This project is no longer under development. Please use as you wish.

This is a tool that uses a combination between a brute force and dictionary attack on a Vigenere cipher. At present, keys are generated using brute force (will soon try passwords generated from a dictionary first). Each key is then used to decode the encoded message input. The output is analysed and then put into a ranking table. Outputs will be ranked on a variety of factors (at present, only number of dictionary words in output are counted). For the future: Better key generation, trying combinations of dictionary words with numbers. If that fails, brute force will be used. For all attempts of the dictionary attack, only keys within the known key length range will be generated. Better ranking system and analysis of possible decoded messages. Note: The version currently released, I made in an evening! It is nowhere near ready for release but is a fun project to think about and I need more ideas for improvements mentioned above. Discuss possible solutions and ideas!

Libcutils provides a self-contained set of fundamental routines which are essential to basically any Unix utility or daemon application written in C. The library provides fundamental data structures such as lists, hash-maps, strings and parsing functions for JSON or the typical dot-file based configuration data. The following list summarizes the currently supported functionality: * length delimited instead of NULL terminated strings * memory management based on reference counting * several list processing functions like iterators and map-reduce * support of [Ideal Hash Tries](http://infoscience.epfl.ch/record/64398/files/idealhashtrees.pdf) for highly efficient hash map data structures * parsers for [JSON](http://json.org) data and the text configuration files found in Unix system * doubly linked circular lists for reliable event queues * support for test and debugging of memory management problems such as memory leaks

Tiny-DSP library contains c sources of a fast, tiny, portable and generic FFT (Fast Fourier transform) and inverse FFT. Supported are all power of two sizes (like 2,4,8,16,32,...) for one and two dimensional floating point arrays.