Open Source Java Data Management Systems

JGP is a GUI for gnuplot (http://www.gnuplot.info/). It is made for all those who just love gnuplot but who found that organizing a large number of datasets and plots from the command line is inconvenient. JGP uses gnuplot as plotting engine.

A graphical library enabling to design complex graphical components and encapsulting the produced components in java beans.

Optical Design Software for optical systems comprised of light sources, lenses, apertures, prisms, imagers, photometers, etc. Simulate light through the system and compute images and intensities at various locations in the design.

Finally, the binary release of the version 0.2.5 is out. Now, Atheris comes with an extensible, modular plug-in architecture, i.e. you can easily write your own graphical analyzer for Atheris. The documentation on how to write you own analyzer will follow in the next days. If you are running a non Debian-based Linux, download the zip file and follow the instructions in the README file. If you have problems, want to contribute your code or have some special needs, let us know and send an email to philipp.eittenberger(Ätt)uni-bamberg.de (If you want the source code of version 0.2.3 and compile Atheris yourself check it out with svn per: "svn co https://atheris.svn.sourceforge.net/svnroot/atheris/trunk atheris")

ADCViewer visualizes analog signals coming from a microcontroller board through the serial port.

A data visualization and mining system to display and operate on data as solid object.

feed4weka is an open library that enriches weka (http://www.cs.waikato.ac.nz/ml/weka/), an open source project for data analysis. It integrates new classification and clustering algorithms, and adds the coclustering and outlier detection frameworks

Software environment for manipulation of DNA and protein sequences in a phylogenetic context.

The purpose of this project is to implement a java program that can show/edit Neural Network objects made in matlab.

AsphaltOpen is a project to visualize data collected during road asphalting operations. Asphalt contractors can use the software to visualize their operations, learn from the visualizations, and improve their processes continually.

Atavi is an interactive genealogical data visualization tool. It uses XSLT to transform XML data into SVG (Scable Vector Graphics) images. Deploy it as a Java servlet and explore visualizations from a browser that supports SVG. GEDCOM import is planned.

BIRD stands for Business Intelligence Research and Development and it is part of the CoIntell Corporation (www.cointell.com). The goal of the BIRD community is to develop smart BI solutions Fast!

Bayesian Network tools in Java (BNJ) is an open-source suite of software tools for research and development using graphical models of probability. It is published by the Kansas State University Laboratory for Knowledge Discovery in Databases (KDD).

BIRBU (BIological Relationship BUilder) is a Java tool for microarray gene expression data analysis. BIRBU identifies biologically significant relationship between genes using microarray data and prior knowledge on relationships between genes.

Bluewave is an object oriented database and application server that provides a neat intuitive way to store data. Bluewave also features a powerful client and server API.

A collection of tools for working with the comparative data analysis ontology including import/export facilities for common phylogenetic file formats, and also a triple-store framework.

The Canopy project is an initiative to merge and expand the functionality of Perl-speaks-NONMEM (PsN), Census, Xpose and PopED. The goal is to produce a coherent, inclusive and convenient platform for pharmacometric data analysis.

This is a short C++/Java/C#/Python benchmark. Based on Paul Heckbert's sources. Thank you Paul!

CAVOR is an engine for building apps that involve both graphic and text/numeric data. Primarily GIS is the initial focus, but consider also CAD, CASE, project management (eg PERT charts), and others. Built-in scripting, C API, also supports Tcl and Java.

Circus is a jMonkeyEngine based cluster-solution for multi-screen VR-systems.

Cyclops is a project to understand Internet Autonomous System or AS level topological changes.

DagMap Vis is a java application aims to visualize DAGs (Directed Acyclic Graph) with a combine node link diagram and an adapted treemap layout. Based on prefuse, the application gives some useful interactions to navigate in hierarchical data structures.

A graphical data manipulation and processing system including data import, numerical analysis and visualisation. The software is written in Java and built upon the Netbeans platform to provide a modular desktop data manipulation application.

DeciGen® is an ERP with added features for help in decision making process. DeciGen incorporates Decision Support System over an framework of ERP to provide a feature rich solution. It aims to achieve the final goal of IT - to run business smoothly. Dec

Diagrams provides base classes for drawing time/distance diagrams and Gantt charts.