Open Source Unix Shell Software Development Software

Foswiki is an Enterprise wiki, typically used to run a collaboration platform, knowledge base or document management system. Users can create wiki applications using the Topic Markup Language, and developers can extend its functionality with plugins. Foswiki stands for "Free and Open Source" wiki to emphasize its commitment to Open Source software.

Borges is an open-source project aimed at XML-aware documentation projects which care about internationalisation, reusable contents, teamwork, etc. Borges is maintained by NeoDoc: http://neodoc.biz

Utility to validate, extract, show and create digital documents included in files with "pk7" and "fp7" extensions such as electronic bills provided by some phone companies in Spain like Movistar and Telefonica.

ADOMA stands for: Alternative Display Of Multiple Alignment. ADOMA can create four different displays of a multiple sequence alignment: a ClustalW alignment in HTML format, a simplified ClustalW alignment in HTML and/or txt format and a colored ClustalW alignment in HTML format. For examples of these outputfiles check the screenshots. ADOMA uses ClustalW to create the multiple alignment from DNA or protein sequences and displays them slightly different than the normal output of ClustalW. ADOMA is a commandline program that can easily be used in pipelines. For more information check the README.md in the Files section. How to cite ADOMA: Zaal, D. and Nota, B. (2016), ADOMA: A Command Line Tool to Modify ClustalW Multiple Alignment Output. Mol. Inf., 35: 42–44. doi: 10.1002/minf.201500083 http://onlinelibrary.wiley.com/doi/10.1002/minf.201500083/abstract

The toolkit glpk supports methods for mixed integer linear programming (MILP). These methods solve Capital Budgeting Problems (CBP). Unfortunately, glpk does not support any multithreading and there is no feature to distribute problems via network connections. Today, this is a pitiable sight, because modern computer systems are coupled by networks and support multi threading. We create a distributed system with Apache thrift and the C-API of glpk. Now, it is possible to use as many cores in a network as you want. With a focus on the MILP methods we implement a load balancing and speed up the solving process in a multiplicative way. Sometimes we have super-linear speedup with a small set of hardware. With a splitting of problems, parallel computing and distributing the actual best solution to all running processes we solve CBP much faster than a sequential processing can do.

CASIMIR is a web-based PHP/MySQL interface which controls over SSH-secured connexions qemu/kvm virtual machines dispatched over several physical servers. It also provides to administrators the ability to delegate control of these machines to other users.

Cress (Communication Representation Employing Systematic Specification) allows graphical description of a wide variety of services such as in data communications/telecommunications, but Cress is not limited to this. The approach allows services to be described graphically as (work)flows of activities. Cress diagrams are automatically translated into formal languages for rigorous analysis and verification, and are also automatically translated into implementation languages for deployment and validation. Cress aims to make service design as easy as possible without requiring specialist development knowledge. It simplifies service creation to drawing diagrams, clicking buttons and defining a few tool parameters. All key functions of Cress can be controlled from the Chive diagram editor. Cress is written using portable and widely used languages (Perl and Java). It can be extended by a developer for other kinds of services that can be characterised by activity flows.

Ccide reads a source program, in one of several programming languages, expands all embedded decision tables, and generates the new, expanded source. Ccidew processes C language programs directly. The script, ccide, uses ccidew and m4, to process BASIC, JAVA, CC, C++, BASH, QB, VB, and EX(euphoria), source files containing embedded decision tables. Ccide checks all conditions once and only once, avoiding side effects. Ccide checks tables for conflicts and other errors. Input example: //DECISION_TABLE: // 1 3 2 2 | light == $$ /* 1=red, 2= yellow, 3=green. */ // N - - - | speed == STOPPED // - - Y - | speed == SLOW // - N - Y | speed == FAST // ______|___________________ // X - X - | Stop(); // - - - X | SlowDown(); // - X - - | SpeedUp(); //END_TABLE:

FrAid(FRactal AID) is an interface to Java, allowing it to proc. math. data(functions/equations). A compl. standalone system utilizing the FrAid prog. lang. is available(no need to be Java programmer to use it!). Use instead of Matlab. High res. graphics

Produce a PostScript representation of a project's source code.

Do you have dozens of tools with dozens of parameters? KISSmenu helps you to organize them, to integrate them and to run them interactively in a terminal based menu or automatically, e.g. starting it up as a cron job. Development or tooling environment: shortcut based menu of commands, which can be used both interactively and non-interactively. Middleware: simply integrates various software through environment variables. Really simple! A 500 lines long bash script easy to maintain, fork or extend.

A web interface based on PHP/MySQL/XML to manage a Internationalization/Localization team and work. eg. Job Assignment, Proofreading, Glossary...

MASyV (Multi-Agent System Visualization) enables one to write agent-based models/cellular automata, eg. in C, visualize them in real time & capture to movie file with MASyVs GUI & message passing lib. Includes examples: Hello World, ants, viral infection

Monitors webpages for changes and emails output with differences to subscribers. Permits user accounts and registration. PHP/MYSQL.

A project to provide change control for OpenDocument files via subversion under Unix. Can check in internal changes in files and allows users to recover any previous version, view logs and compare with older versions.

OpenESM project to promote software development of enterprise systems management. Focus areas are (Performance and Availability, Configuration Management, Data Warehousing, Reporting and Correlation).

A collection of programs and subroutines to help Pick/Multivalue programmers accelerate development while improving user-friendliness.

A tool for the development and customization of an information system for traceability and workflow management of virtually any business process or product.

A service-oriented, single-source, Java integration server with virtual Service Stores(TM) that expose services via web services, HTTP and more. Service Flows provide process automation. Mainframe, database, email, web, soap & ftp adapters are included.

idyuts is \"I Dare You to Use This Shell\"; a pre-hibernate approach to replacing an ORM written with jython functors into a pure-Java language command pattern. The \"pipeline codegen artifacts\" are simple IoC templates, and trivial to adapt

Texinfo Web Publisher is a Makefile based publishing system featuring simultaneous con- tent creation into HTML, non-split HTML, Framed HTML, HTML Zip, XML, DocBook, PDF, DjVu, PostScript, DVI, Plain text, Info and EPUB book formats. All Texinfo Web Publisher output formats are from a single source. Texinfo Web Publisher can be used for website creation has FTP deployment capabilities and supports Cascading Style Sheets (CSS). Texinfo Web Publisher is a low maintenance solution for publishing websites with multi- format matching content. Texinfo Web Publisher is a wrapper for GNU Texinfo.

The project supplies a template or skeleton for mainly batch processsing applications which make use of the korn Shell (ksh / pdksh), Perl and other executables (see docs). Functionality @ shell/Perl level: logging, sending email to the support, ...

WSDL2XForms generates XForms for the operations of a given WSDL file. The tool is implemented using Java and XSLT.

Diary is a console-based diary and todo list that leverages the capabilities of the Unix toolbox, using date, grep, less and a host of others -- as well as your favorite text editor -- to produce a suprisingly capable tool.

Inotifyfs is a set of scripts, primarily on bash to allow user keep remote and local folders synced in real time in efficient way based on inotify kernel evens and function in user space.