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Commits on Mar 19, 2024

• Add a module to load RefSeq genomes by ids

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  ToshkaDev

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Commits on Oct 31, 2023

• Fix the issue introduced by the update in NCBI

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  ToshkaDev

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Commits on Aug 27, 2023

• Update readme.md

  ToshkaDev

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Commits on Aug 25, 2023

• Update readme.md

  ToshkaDev

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• Change image tags of 'mist-pg-db' and 'mist-pipeline' to bioliners/*

  ToshkaDev

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Commits on Aug 17, 2023

• Update readme.md

  ToshkaDev

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Commits on Mar 30, 2023

• Merge pull request #1 from bioliners/api_route

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  ToshkaDev

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• Change the api image tag to bioliners/mist-api

  ToshkaDev

  committed
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Commits on Mar 9, 2023

• Change base URL of API to the OSU server

  ToshkaDev

  committed
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Commits on Mar 8, 2023

• Make BioSample model accessible to Genome model

  ToshkaDev

  committed
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Commits on Jun 11, 2021

• restore gtdb migration; update config to use postgres 13.3

  lukeulrich

  committed
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Commits on Apr 8, 2021

• Merge pull request #103 from biowonks/lu/seed-genbank-genomes

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  lukeulrich

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• seed genbank genomes module

  lukeulrich

  committed
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Commits on Mar 25, 2021

• Merge pull request #98 from biowonks/lu/optimize-genome-signal-genes-route

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  lukeulrich

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• optimize fetching signal genes by kind

  lukeulrich

  committed
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• prevent gtdb migration until database upgraded to postgres 13

  lukeulrich

  committed
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• fix query generator table quoting

  lukeulrich

  committed
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• Merge pull request #97 from biowonks/lu/gtdb-module

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  lukeulrich

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Commits on Mar 17, 2021

• GTDB module

  lukeulrich

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Commits on Mar 10, 2021

• BioSampleService returns null when no data found on NCBI

  lukeulrich

  committed
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• update sequelize-migrator package

  lukeulrich

  committed
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Commits on Mar 4, 2021

• optimize query planner to use proper index when ordering and limiting signal genes queries

  lukeulrich

  committed
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Commits on Feb 25, 2021

• remove unique components.version constraint

  lukeulrich

  committed
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Commits on Feb 11, 2021

• update docker images to use node 14.15.5; fix api doc building

  lukeulrich

  committed
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• Merge pull request #91 from biowonks/lu/upgrade-packages

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  lukeulrich

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• biosamples api routes

  lukeulrich

  committed
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• fix biosample foreign key

  lukeulrich

  committed
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• BioSample bug fixes

  lukeulrich

  committed
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Commits on Jan 14, 2021

• BioSample undo

  lukeulrich

  committed
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Commits on Dec 17, 2020

• clean up, update packages

  lukeulrich

  committed
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• eslint fixes for mist-api

  lukeulrich

  committed
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• remove heroku procfile

  lukeulrich

  committed
  a7c7fb7

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• fix mist-api docs

  lukeulrich

  committed
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Commits on Dec 10, 2020

• remove bluebird; more conversions to async / await

  lukeulrich

  committed
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Commits on Dec 3, 2020

• fixed BioSample module; converted much of pipeline to use async / await

  lukeulrich

  committed
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