Wavefront alignment algorithm (WFA): Fast and exact gap-affine pairwise alignment

tools for working with genome variation graphs

WFA-lib: Wavefront alignment algorithm library v2

efficient alignment of strings to partially ordered string graphs

Artifact for paper "PIM is All You Need: A CXL-Enabled GPU-Free System for LLM Inference", ASPLOS 2025

The CORE-V CVA6 is an Application class 6-stage RISC-V CPU capable of booting Linux

a Pin tool for collecting microarchitecture-independent workload characteristics

Used to extract seed hit alignement subsequences of the read, and the subsequence of the reference they are being aligned to

Sequence-to-graph mapper and graph generator

Forking so I can add serialization for benchmarking

Substring index for paths in a graph

A benchmark suite to study the performance characteristics of genomics applications

A fast minimum-weight perfect matching solver for quantum error correction

WarpX is an advanced electromagnetic Particle-In-Cell code.

AMReX: Software Framework for Block Structured AMR

A warmup activity to become familiar with Git and GitHub.