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base repository: psobolewskiPhD/scipy2024-tutorial
base: main
head repository: scipy-2024-image-analysis/tutorial
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- 16 commits
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 - 4 contributors
 
Commits on Jul 6, 2024
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Fix code in exercises (scipy-2024-image-analysis#3)
* Use consistent part and file numbering * Add missing import * Rename solutions to match excercises * Sync code cell between exercice and solution * Update order to match planned speaking order * Update copyright for some reason this defaults to 2023 according to the docs? [1] [1] https://jupyterbook.org/en/stable/customize/config.html#configuration-defaults * Reorder speakers according to review and add Peter as well.
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Commits on Jul 7, 2024
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Use joined scikit-image & napari logo (scipy-2024-image-analysis#7)
Add & use joined skimage-napari logo instead of the old napari only logo.
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Update 02_segmentation_and_measuring.md to mention nbscreenshot expli…
…citly (scipy-2024-image-analysis#5) * Update 02_segmentation_and_measuring.md to mention nbscreenshot explicitly * small copy edit
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Commits on Jul 8, 2024
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Add dedicated page for running the notebooks (scipy-2024-image-analys…
…is#8) * Add dedicated page for running the notebooks * add jupyterlab-myst to conda env * add jupyterlab-myst to req.txt * add notebook setup to ToC and copy the clone/zip to install dependencies. * clarify the install/clone/download * Update for review comments * Move the new content to the existing install file * Fix ToC * Cleanup / streamline headings Two top-level headings weren't rendered correctly by jupyter-book in the sidebar. Instead just rename the section to "Setup" which should be more fitting. Also make sure that all headings use the same mood: imperative. --------- Co-authored-by: Lars Grüter <[email protected]>
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Update install_dependencies.md to include arm64 (scipy-2024-image-ana…
…lysis#6) * Update install_dependencies.md to include arm64 * Remove the note about not using the arm64 miniforge. * fix numbering, just in case
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Commits on Jul 9, 2024
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Tweak exercises 3 and 5 in filtering (scipy-2024-image-analysis#9)
* Remove misleading instruction That reshape isn't actually necessary. * Tweak exercise 3 Derive the center from the shape.
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Commits on Jul 13, 2024
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Support widgets via ipympl backend (scipy-2024-image-analysis#11)
I did not fix the convolution example; that one looks like it may have step-dependent figure construction.
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