* WIP

* Add ML example

* Save for merge

* Update

* Parameter types more (#13)

* fix: import error from exception module (#525)

* fix: replace list with sequence (#524)

* Fix min window type check (#523)

* fix: replace dict with Mapping

* fix: replace list with Sequence

* fix: add type hint

* fix: does not accept None

* Change docs badge (#527)

* fix: parameter, target_space

* fix: constraint, bayesian_optimization

* fix: ParamsType

---------

Co-authored-by: till-m <[email protected]>

* Use `.masks` not `._masks`

* User `super` to call kernel

* Update logging for parameters

* Disable SDR when non-float parameters are present

* Add demo script for typed optimization

* Update parameters, testing

* Remove sorting, gradient optimize only continuous params

* Go back to `wrap_kernel`

* Update code

* Remove `tqdm` dependency, use EI acq

* Add more text to typed optimization notebook.

* Save files while moving device

* Update with custom parameter type example

* Mention that parameters are not sorted

* Change array reg warning

* Update Citations, parameter notebook

---------

Co-authored-by: phi-friday <[email protected]>

* bump version

* Update pyproject.toml

* chore: upgrade poetry2.0 & apply pep621

* fix: replace poetry action(not support 2.0)

* fix: exclude one matrix

* chore: split numpy deps

* fix: numpy constraints

* fix: install root

* chore: use install-poetry

* Add functionality to save and load state of the BayesianOptimization

* Update basic-tour with new save and load functionality

* move load stateful path to optional argument in class instantiation

* add test for string params, update tests with new load functionality

* updated basic tour with updated paths

* add the random state to the set of things to list of saved items

* move state loading to separate function, add functionality for saving acquisition function state

* use new loading schema

* update tests, add integration tests for saving and loading acquisition functions

* undo abstractmethod implementation for get and set state saving functionality

* reorganize state saving and loading for consistency

* move integration tests into acquisition

* remove unndecessary test, add tests for domain reduction and custom parameters

* make test more comprehensive

* add test logs

* sync execution counts from basic tour

* linting, whitespace removal, import structuring

* ruff fix for string literal in error message

* fix ruff complaints

* make all side param comparisons almost equal to account for slight numpy differences

* reformat array comparison check

* upgrade poetry2.0 & apply pep621 (#545)

* chore: upgrade poetry2.0 & apply pep621

* fix: replace poetry action(not support 2.0)

* fix: exclude one matrix

* chore: split numpy deps

* fix: numpy constraints

* fix: install root

* chore: use install-poetry

* Fix coverage report (#552)

* remove unnecessary files, have acquisition baseclass functions raise errors

* remove duplicate acquisition functions random state

* ruff format

* add  type hints for base acquisition get/set functions

* remove noreturn

* remove former saving functionality from notebooks

* increase legibility of custom acquisition example

* explicitly stating the optionality of the saving and loading in custom acq functions

---------

Co-authored-by: phi-friday <[email protected]>
Co-authored-by: till-m <[email protected]>

* remove observable pattern, jsonlogger, and any use of events

* update notebooks to new logging system

* update tests for new logging system

* make ruff formatting tests pass

* add tests for the screen logger class

* pass in logger function arguments seperately

* add tests to check params_config implementation

* remove unnecessary attribute descriptions, move params_config to function argument

* make verbosity level check explicit

* format negative scientific notation correctly

* use ternary operator to make computer happy

* format parameter values correctly

* Update acquisition.py

* Update acquisition.py

Code linter optimisation with Ruff

* Update acquisition.py

Computational-efficiency of the MIP identification increased

* Update acquisition.py

Linter improved

* Update acquisition.py

* Rename minimization methods for clarity and update tests accordingly

* Refactor differential evolution import and optimize acquisition function

* Modification to differential evolution solver integration and refine continuous parameter search

* Refactor DifferentialEvolutionSolver initialization to support scipy version compatibility

* Removes fixed algorithm for acquisition function minimization and applies kernel transformation to x_min

* Fixing formatting issue

* Fix acq min bug

* Update docs, make `random_state` not a property of acqs

* fix giving bad seeds to l-bfgs-b

* remove debug code

* Relax constraint.approx test slightly

* GPHedge: ensure random state

* nitpick fixes

* Make constraints work with parameter types

* Use `deepcopy` when copying constraint in `ConstantLiar`

* Move the instantiation of `ConstraintModel`

* Update warning

* remove unnecessary random state storing

* Remove unnecessary import

* Add a `.random_sample` function to the optimizer

* Fix acq min bug

* Update docs, make `random_state` not a property of acqs

* fix giving bad seeds to l-bfgs-b

* remove debug code

* Relax constraint.approx test slightly

* GPHedge: ensure random state

* nitpick fixes

* Make constraints work with parameter types

* Use `deepcopy` when copying constraint in `ConstantLiar`

* Move the instantiation of `ConstraintModel`

* Update warning

* remove unnecessary random state storing

* Remove unnecessary import

* Add a `.random_sample` function to the optimizer

* Fix types, refactor some test code

* Use AE spelling

* Remove unnecessary `extra_kwargs`