FIX: Add environment argument to TaskBase._run_task() and Workflow subclass

[ghisvail]

Types of changes

• Bug fix (non-breaking change which fixes an issue)

Summary

I bumped the Pydra version used by Clinica to 0.23 and ran the test suite.

There are a few failures, but one caught my attention in particular:

----------------------------- Captured stdout call -----------------------------
in SUBM None
_run_task() got an unexpected keyword argument 'environment'

The first line is a residual print statement (removed by the first commit).

The second one suggests an interface mismatch (fixed by the second commit).

[codecov]

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 84.27%. Comparing base (e284b65) to head (14d1e19).

Additional details and impacted files

@@            Coverage Diff             @@
##           master     #739      +/-   ##
==========================================
- Coverage   84.28%   84.27%   -0.01%     
==========================================
  Files          26       26              
  Lines        5128     5127       -1     
  Branches     1447     1447              
==========================================
- Hits         4322     4321       -1     
  Misses        800      800              
  Partials        6        6              

Flag	Coverage Δ
unittests	84.27% <100.00%> (-0.01%)	⬇️

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[tclose]

How did the environment kwarg get dropped? Was this something I introduced merging in my branches?