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Add warning if a Minibatched variable is used without total_size #7742

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Apr 1, 2025
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Add warning if a Minibatched variable is used but total_size is forgo…
…tten

This should help catch a well-known Minibatch footgun
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zaxtax committed Mar 30, 2025
commit 5febf122c0751dbdd927916100327f23b0e64c6b
10 changes: 9 additions & 1 deletion pymc/model/core.py
Original file line number Diff line number Diff line change
Expand Up @@ -40,7 +40,7 @@
from pytensor.tensor.variable import TensorConstant, TensorVariable

from pymc.blocking import DictToArrayBijection, RaveledVars
from pymc.data import is_valid_observed
from pymc.data import is_valid_observed, MinibatchOp
from pymc.exceptions import (
BlockModelAccessError,
ImputationWarning,
Expand Down Expand Up @@ -1241,6 +1241,14 @@ def register_rv(
self.add_named_variable(rv_var, dims)
self.set_initval(rv_var, initval)
else:
if (
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this should have checked if minibatch is anywhere in the ancestors of value not just immediately

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Do we need to do that? This check is only for observed random variables. I thought for those we don't allow the value to depend on another node

isinstance(observed, TensorVariable)
and isinstance(observed.owner.op, MinibatchOp)
and total_size is None
):
warnings.warn(
"total_size not provided for observed variable that uses pm.Minibatch"
)
if not is_valid_observed(observed):
raise TypeError(
"Variables that depend on other nodes cannot be used for observed data."
Expand Down
7 changes: 7 additions & 0 deletions tests/variational/test_minibatch_rv.py
Original file line number Diff line number Diff line change
Expand Up @@ -112,6 +112,13 @@ def test_random(self):
assert mx is not x
np.testing.assert_array_equal(draw(mx, random_seed=1), draw(x, random_seed=1))

def test_warning_on_missing_total_size(self):
total_size = 1000
with pytest.warns(match="total_size not provided"):
with pm.Model() as m:
MB = pm.Minibatch(np.arange(total_size, dtype="float64"), batch_size=100)
pm.Normal("n", observed=MB)

@pytest.mark.filterwarnings("error")
def test_minibatch_parameter_and_value(self):
rng = np.random.default_rng(161)
Expand Down
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