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Qauntification outputs using different references

Status: Open.

#42 In COMBINE-lab/oarfish;

· AhmedSAHassan opened on Mar 19, 2025

Gene-level data from oarfish outputs

Status: Open.

#41 In COMBINE-lab/oarfish;

· lianov opened on Jan 31, 2025

Include the classic Salmon sequence collection hash (SHA256)

Status: Open.

#40 In COMBINE-lab/oarfish;

· mikelove opened on Jan 31, 2025

Question: Oarfish suitable for Quantifying Haplotype-Resolved Transcriptomes

Status: Open.

#33 In COMBINE-lab/oarfish;

· nadjano opened on Oct 9, 2024

Add option to use UMI information from BAM files (MI or RX tag)

Status: Open.

#14 In COMBINE-lab/oarfish;

· gringer opened on Mar 24, 2024

Harmonise output format to that of Salmon

Status: Open.

#13 In COMBINE-lab/oarfish;

· gringer opened on Mar 21, 2024