ENH: Utility that returns the B0FieldSource of a given potential EPI target
#151
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…EPI target This code adds a ``get_identifier()`` interface that allows the user find the a list of ``B0FieldIdentifier``(s) that are associated with a given file. ATM, it pulls the information from the ``IntendedFor`` metadata of fieldmaps, but in the future, it should first read the ``B0FieldSource``. Originated-by: nipreps/dmriprep#140. Resolves: nipreps#148.
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- Coverage 94.72% 94.62% -0.11%
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Branches 145 150 +5
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+ Hits 1023 1038 +15
- Misses 31 32 +1
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oesteban
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2.0.0rc4 * FIX: Convert SEI fieldmaps given in rad/s into Hz (#127) * FIX: Limit ``3dQwarp`` to maximum 4 CPUs for stability reasons (#128) * ENH: Generate a simple mask after correction (#161) * ENH: Increase unit-tests coverage of ``sdcflows.fieldmaps`` (#159) * ENH: Optimize tensor-product B-Spline kernel evaluation (#157) * ENH: Add a memory check to dynamically limit interpolation blocksize (#156) * ENH: Massage TOPUP's fieldcoeff files to be compatible with ours (#154) * ENH: Add a simplistic EPI masking algorithm (#152) * ENH: Utility that returns the ``B0FieldSource`` of a given potential EPI target (#151) * ENH: Write ``fmapid-`` entity in Derivatives (#150) * ENH: Multiplex fieldmap estimation outputs into a single ``outputnode`` (#149) * ENH: Putting the new API together on a base workflow (#143) * ENH: Autogenerate ``B0FieldIdentifiers`` from ``IntendedFor`` (#142) * ENH: Finalizing the API overhaul (#132) * ENH: Keep a registry of already-used identifiers (and auto-generate new) (#130) * ENH: New objects for better representation of fieldmap estimation (#114) * ENH: Show FieldmapReportlet oriented aligned with cardinal axes (#120) * ENH: New estimation API (featuring a TOPUP implementation!) (#115) * DOC: Minor improvements to the literate workflows descriptions. (#162) * DOC: Fix typo in docstring (#155) * DOC: Enable NiPype's sphinx-extension to better render Interfaces (#131) * MAINT: Drop Python 3.6 (#160) * MAINT: Enable Git-archive protocol with setuptools-scm-archive (#153) * MAINT: Migrate TravisCI -> GH Actions (completion) (#138) * MAINT: Migrate TravisCI -> GH Actions (#137) * MAINT: Minimal unit test and refactor of pepolar workflow node (#133) * MAINT: Collect code coverage from tests on Circle (#122) * MAINT: Test minimum dependencies with TravisCI (#96) * MAINT: Add FLIRT config files to prepare for TOPUP integration (#116)
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This code adds a
get_identifier()interface that allows the user find thea list of
B0FieldIdentifier(s) that are associated with a given file.ATM, it pulls the information from the
IntendedFormetadata of fieldmaps,but in the future, it should first read the
B0FieldSource.Originated-by: nipreps/dmriprep#140.
Resolves: #148.